RNA id: XM_043224600.1


Basic Information

Item Value
RNA id XM_043224600.1
length 6976
RNA type mRNA
GC content 0.50
exon number 35
gene id eif4g3b
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12734988 ~ 12769930 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGTGGTAGGTGATTGGTTACAAGAGagcattattaattcataaattctTACAACATTATGATAATTATACAGTACGTAACATTGTTGAGACTAGACTGTATGTTAGTACCTGAATTGCGTGTTCAGCTGTGGTCGCTAGATGTCACTGTAACATCACAAATCGGGCCCGAAGGGCTCCATACACGCGAAATGGTtggcatattatatatatacatacggcGATGGCATTAAAACCGCATTTTTATCTAAAGCCGTTTCTTTTGGCTGTTAGGGCGTTTATTATTAGTTCCCTGGCCGACATCCAAGTAGGTTATGAGTTCCGGATAGCGCGTTCCGTACTTCCGTATACACTCGTTGTAAATTCCACTCTCCGAAGTGTCCCGAAAACACCCGAAGTAAAACGAAAGATCGGTCCTGTAGGACTGCTGGAGTCGGCCACAGCGCCATGTTGAACGGAATCATCACACTCCGTGGAGATACTCTCGTCAAAGAGCAGTTGTAAACaaagtattattcatttttcaaaggGGGCTCACCTGTCAAGATCGCCCTGGCAAGAAGAGGCCAACTAGATCCTCGGAAACCCCGGCCGGGGAGGGGGAACAGCCCCCCAACCTTCAGCAATGAAGATAAACCACAATAAGCGCTAGCTGGCTAACTTTAGCCTGCTATTCTATCAATAAGCTAGCTAGCCTGTTAGCTCAAGCTTTTCTATCCGCTCAGACACCGGCAACCTGCTCCTAAAAGGCCCGGGGTTGACGTAACTCGCCAGCAATATTTTTTCTTACGTGCACAGTTTAGCCGCTAGCTagtttattactgtaaatatctGTAAAGCCGCgcgtttgttgtttttttttatttgcgatGAGTTTGCCGCCGAAAGCGGTGCAGAAACCAGCCGCCGCTGCCGCCGCTGGAACTGGACCTGGAACCGGGCAGTCCCGGGCCACCCTGACCCCAGTGCCGCTACCGCCGGGGACGCCGGTGGCTCAACAGCCGCAGACACAGCTCCCAAGAGGGCCCCTGGACGAGCGAATCTGTGCGGTCTACAGTGTACAGAGACCCCCTGGCCCCCCATATACAGCACATGAAATCAACAAGGGACACCCTAACCTAGCGGCCACCCCGCCAGGTCACGCCTCCTCCCCTGGACTCTCTCAGGTATCAGTTCCAACAGTATCCACTCCGCATCTGTATGGTCACCCTAAAGGCTGGGATACAGGAGGAGGGTCTCTGTACACAACGGGGCAGAATGCCGGCACAACCCCTCTGGTCTTCTCTCAGCCAACCCAGCAAATGAACGCACAGCCTCAGAGCCGCCCGTTTGCCCCTGGGCCTCGTCCTACCCATCACCAGGGAGGATTCAGACCCATTCAGTTTTTTCAGAGGACGCAGATGCAAACGGCGCGGCCCACCATTCCAAGCAACAACCCTCCCATTCGGCCCACGTCTCAGACCCCCGCAGCAGCGGTCTACCCCCCTAATCAGCCCATCATGATGACCATGGCTCCCATGCCCTTTCCTTCCCCACAGACAGCGCAGTACTACATCCAGCAGtacCGTCACAGTGCTCCTCCATATGTGGGGCCTCCTCAACAGTACCCAGTACAGCCCGCTGGACCCAGTACCTTCTATGCTGGACCCAGTCCAGGGGACTTTCCTGCACCTTATGCAGCAGGACCTCCCTACTATCCCGGGCAGCCCATGTACACACCATCTCCATCCATTATAGTGCCTACACCACAACAACCTCCACCTGCTAAGAGGGAAAAGAAAACAATCCGCATCCGAGACCCCAACCAGGGTGGCAAGGATGTGACAGACGAGATATTATCAGGGGTGGCCGGAAGTCGGAACCCAACCCCACCTGTGGGACGGCCCTCCTCCACTCCTACACCTCCACAGTTTTTATGTCACCCTCATTATCCTCACATTTTGTTCCTCAAATCCCAGCAGCTGAACAGCCAGGTAGCGGATCACGGCCACGGCATGTATAACATGGACAGCACCCCGCTCCTTTCTTCATCCATCGACTTGAAAGCAGATGACAAGCCAAAACTAGAGTTTGCCTCGCAAAGATCTGCATCCCCTGGATTGCGGCAGCCAGAGACTCCACTGGAGAGAAGAGATCCCAGTAGCCCAGTCCAGGCGCCCTCTCCCCCACAGAAAACTGAGCTTCCCCCCTCCGGCCCAGAGACGGCCTCAAGTGTAGCTACATCCTCGACTCCTTCCGTACCTGCCTCAACAGTGGAGTCAGCTGACACCCCGAGCCCATCAGCTGAGCCCGCCCCCACTAAAGCTATCACACCCGAACCTGAAAGCTCAGAGCCGGAGAAATCCTCCTCAGAGCAGCCCTCACCTCAGAGCCTGTCTACGTCCCCTGCCCAGCCTGAAAAGGCCATCAATGGGCTGACGGACACCGATGCTGCTCCCTCGAGTGAAGACTTGGAATCCCAACCCAGGGAAGTCTCTCCATTGCTGCCTACTTCCAGCGTGCCCCAGTGCCCCAGCCCGGAGCCCAGGCCCATCACACCGGCGCTGGAGGCCGAGTCTGTGACGGGAAAGGCGGATAACCCCTCGTCCCCTGCTGAGGACAGCACTGGATGCCCCGTCACTCCGTCCCTCTCCTCCTCCACTACTGCTGCTATCTCCACCACACCTGCTCCTCCTCCAGGCCTCACGCACCCAAGTCAGGTTTCTGCAGGGTCAGCCAAGAGCCCGTCTACAGGAGCAGAGCTCAAGGAAACAGGGAAGGAGACCGAGGCCTTGCCGGACAAGAGAGGCGAGCCCTTCTTGCAGTCCAGAAAAAGCTCAAGTCAAACTACATCTAGTGCACCAAAGACCTGGAAGAAGCCAAAAGAGGACATACCTGTAGGGCAAGATCAGTGTCCAGACAAAGAgGAGGACATGGATGAGTCCTCCATGGAACCTGCTGCAAAGAGTCCCAGTCCTCCTCCTGTGGAGGTGGAGAGGAGGCCGTCAGCAGGAGCTGTGCTTGAGGAGAACGGAGAACAGGAAGCAGAGCCTCTGAGAAACGGGGCTGAACACGCCTCTGAAACCGAAAGCAGTGACAGCACACACCCGCCTGCAGTCAAAGAGCCGCTGATCAAAGCACTGCCACAGCCTGCGGAGAAGAATGGAAAGAAGCAGTATGACAGAGACTTCCTGTTGGGCTTCCAATTTATGCCTGCATGTGTGCAGAAACCAGAGGGGCTTCCTCCCATTTCTGATGTTGTTCTGGATAAGATTAACCAAAATAAGCTGCCCATGCGGCCAGTAGACCCACGTGTGATTTCCAGAGGCCCGGACTTCACGCCAGCGTTTGCTGATTTTGGCAGACAGATTACAGGAGGCAGGGGAGCACCGCTGCTGAATGTTGGCTTGCGTCGCCCACCTGGACGCAAGATCATCACAAACGTGTCAGTGAATGATGAGGTGCAGCTGAGGACGACAGAGAATGCCTGGAAACCTGGCTTGAAGCGGGAAAACGTCATTGACGATTCGGAGACCCAGAAAACTCAGGAGCTTTTCCGAAAAGTGCGTAGTATTCTCAACAAATTGACGCCCCAGATGTTCAACCAGCTGATGAAGCAGGTGACCGACCTCACCATCGACACGGAGGAGCGGCTCAAAGGCGTCATAGACCTGGTTTTTGAGAAAGCCATTGATGAACCCAGCTTCTCTGTGGCCTATGGCAATATGTGCAGCTGTCTGGCCACGTTAAAAGTGCCCATGACGGATAAGCCCAGCAGCACTGTGAATTTCCGGAAGCTTCTTCTGAATCGCTGTCAGAAGGAGTTTGAAAAGGACAAAGTGGATGACGATGCCTTTGAGAAGAAACACAGGGAGCTGGAAGCTGCTACCTCAGCTAGCGAGCGGGAACGGCTTCAGGAGGAGCTGGAAGAGGCGAAAGATAAGGCCAGAAGACGCTCCATTGGAAACATCAAGTTCATCGGTGAGCTCTTCAAGCTGCGGATGCTGACAGAGGCCATCATGCACGACTGTGTGGTGAAGTTGCTGAAAAACCACGACGAGGAATCACTGGAGTGCCTGTGCAGGCTGCTCACGACTATTGGCAAGGACCTGGACTTTGAGAAAGCTAAGCCACGAATGGATCAGTACTTTAACCAGATGGAGAAAATAGTAAAGGAGAGGAAAACTTCATCTCGCATTCGGTTCATGCTTCAGGATGTTATTGACCTGAGATTGCACAATTGGGTGTCTCGGAGAGCTGACCTTGGCCCAAAGACCATTGAGCAGATCCATAAAGAAGCAAAGttggaggagcaggaggaacAGAGGAAGGTCCACCAGCAACTGCTGTCCAAGGACAATAAGAGGAGACCAGTGGTGCAGAGAGAGGAGACCTGGAGCACTGTGCCTATGACTAAGAACAGCAGAACAATAGACCCCGCTAAGATTCCCAAGATCTCTAAGccaacGATAGATGAGAAGATTCAGCTGGGACCAAGAGCTCAGGTGAACTGGATGAAGGGCAGCAGTGGAGGGGCTGGAGCCAAGGCCAGTGAGTCAGATGTCTCTCGTCCCAGTGCCAGTTTAAATCGTTACTCACCCCTGCAACCCTCAGTGTCCCCAGCCTCCTCTTTACCCTCTACATCCCCAGATTTTGATGCCAGGAGAGTTCTCAGCAGTCGAGGAAGCTCAGGACGAGAACGTAATGACAAGCCTTTGAGTGCGGGTCCCGCTCGGACAGGGCCCATCTCATTGAGTAGCAGCAATAAGGAGGCTCCTGAGGAGTCGGCCCAGGAAGTGTCCCGCAGAGACTCGAATGCCTCAGACACACCCAAGCTGCCCGCCAGCACTGCAGACAAAAGCAGACTGGAGCGTAGCCAATCCAGGGAGTCTGCTGTTAAACTTGAAGTACTGTCAGGACCCTCTCCAGATAAGCCTACATTAACAGAAGAGGACATGGAGAGGAGGTCCAAGTCCATTATTGATGAGTTTTTGCACATTAATGATTACAAGGAGGCAGTGCAGTGTGTGGAGGAACTAGAGCAACCCGCCATGCTCTATGTGTTTGTGCGGGTGGGCGTTGAGTCCACTCTGGAGAGGAGTCAGATCACGCGAGACCATATGGGTCATCTGCTCTACCAGCTCCTTCAGGCTGGAATCCTCCACAAACTTCAGTTCTTTAAAGGGTTCTCTGAAACTCTTGAATTAGCAGATGATATGGCCATTGATATTCCCCATATATGGCTGTACCTTGCGGAGCTGGTGACCCCTGTGCTTCGAGAGGGGGGAATCTCTATGAGAGAATTATTTAGTGAATTTAGCAAACCATTACTCCCTGTGGGAAGAGCTGGGATATTATTTTCCGAAATATTGCACCTTCTATGCAAACAAATGAGCCATAGGAAAGTGGGATCATTATGGAGGGACTCTGGGTTGAGCTGGACAGATTTTATACCTGAAACGGAGGATGTGAACAGCTTCATCACAGAACATAAACTAGACTTTACACTTTCTGACGGCTCAGACCCGACCGAGGCTGTCTCTAAGAGAACACTCTCGCCTGAGGAACTGAACAAGCAACTTGAAAAACTACTACTGGAGGACATGGCTGGTGATGAACGAATCTTCGACTGGGTTGAGGCCAATCTAGATGAATCAGAAATGAGTTCACCTCCTTTCCTCAGAGCTTTAATGACTGCTGTGTGCAAGGCAGCAGTGAAAACTGAGGGCTCCTCGTACAAAGTGGACCTGTCCATAATCCAGAGGAGATTGCCTGTATTACACAAGTACCTTAActcagacacagagagacagttGCAAGCACTTTACGCACTTCAAGCATTGATAGTAAAACTGGACCAGCCTGCTAATTTGCTACGGATGTTCTTCGACTGTTTGTATGATGAGGATGTGATATCTGAAGACGCTTTCTATAAATGGGAGGTCAGTAAAGACCCCGCTGAACAGCAAGGCAAAGGTGTGGCCCTGAAGTCAGTCACTGCCTTCTTCACGTGGCTGCGCGAGGCAGAGGAGGAGTCGGAGGACAATTGACGAGGGGACAAACGGACACATTTGCCAACTAGTTCCGAAGAGACGATAGTCGCTGAAACAATAActgcatcaaattaaaatgtaaaaacataacaaGCAACACATTATGCATCAGGATGGATGGAGTGCGACAAGATTTGGAATGGTACGGTTCACTGACATACAGCGACCTTATTACGACTTACAATTGCTGGAGcactaaaaaatgtattatttatagaaatgttgcatttaagttttttattttctcttttgttactttttaagaggactttaataatacaaacatgcaacaatgaaatgaaacataAGTTCAGACtcgttaatttatttttttttttaagaacagcGTAAACAAAAGGGTATTTAACATCCGTGGACAGACGCAACAAGCAGTTATCGGTGGATAGAGAAATAACaatgataattttattattaatataatgacAATAACAGTGAGTAAACAACTTCCATGATTTTCAGATagttggaaaaatgtttttttttttttttgttggatgAGCACAGAGAAGACCTGGTCTGCGTTTGGTACATCAGTACTGAAGTGTTTAGTACGTGTTTAAGGTTATTATCTCAATAACCATACCAAATGCTCCTCTGCTTTAGCTTGCTCTTTGTGAAACATTTAATCCGGCAGAAACTTGCAGGAACTATGCATTCAGGGGACTGCTGGGATCACATGACGAGAGCTCAGAATGGACATCAACGAGCAGACGGTGACGTGTACAAAACCACTAGGGAGATGTTGCTGAACCTAAAGTGCTTGTTATTCTTCATACTGATAGAGCAAATTTAAAgcttgtaaataaattaaagacaaaaaagattcataaaagTACAAGACCGTGGTGATGGTGTGCATTTTCTACAGTGTTGTCAATGAAGCCTTGCTGgttttgtgtgaaaatacaCTAATGTTCAAACGTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232617 lncRNA upstream 348608 12353090 ~ 12386381 (+) False G157084
TU232620 lncRNA upstream 348608 12361473 ~ 12386381 (+) True G157084
TU232621 lncRNA upstream 348608 12361695 ~ 12386381 (+) False G157084
TU232604 lncRNA upstream 483011 12246217 ~ 12251978 (+) False LOC122328708
TU232614 lncRNA upstream 488888 12245874 ~ 12246101 (+) True G157081
TU232925 lncRNA downstream 83311 12853241 ~ 12853832 (+) True G157294
TU232954 lncRNA downstream 219871 12989801 ~ 13040412 (+) True G157317
TU232968 lncRNA downstream 336530 13106460 ~ 13106957 (+) True G157326
TU232971 lncRNA downstream 345028 13114958 ~ 13115174 (+) True G157329
TU233085 lncRNA downstream 641740 13411670 ~ 13494477 (+) False G157408
XM_043224312.1 mRNA upstream 1243 12727916 ~ 12733746 (+) True lactbl1a
XM_043224141.1 mRNA upstream 114920 12613329 ~ 12620069 (+) False dhrs3a
XM_043224140.1 mRNA upstream 114920 12613379 ~ 12620069 (+) True dhrs3a
XM_043224142.1 mRNA upstream 122628 12602134 ~ 12612361 (+) True igsf21b
XM_043225398.1 mRNA upstream 134522 12574883 ~ 12600467 (+) False arhgef10lb
XM_043225480.1 mRNA downstream 174328 12944258 ~ 12953015 (+) True LOC122329270
XM_043225042.1 mRNA downstream 192365 12962295 ~ 13037553 (+) True rap1gapa
XM_043225044.1 mRNA downstream 192365 12962295 ~ 13037553 (+) False rap1gapa
XM_043225047.1 mRNA downstream 192366 12962296 ~ 13037553 (+) False rap1gapa
XM_043225048.1 mRNA downstream 210420 12980350 ~ 13034777 (+) False rap1gapa
unassigned_transcript_2622 other upstream 1216453 11518465 ~ 11518536 (+) True trnae-uuc_33
unassigned_transcript_2620 other upstream 1219118 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2619 other upstream 1221143 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2618 other upstream 1222291 11512625 ~ 11512698 (+) True trnan-guu_35
TU231904 other upstream 1557956 11174421 ~ 11177033 (+) True G156586
XR_006247901.1 other downstream 1284434 14054364 ~ 14054500 (+) True LOC122329331
XR_006247900.1 other downstream 1286755 14056685 ~ 14056821 (+) True LOC122329330
XR_006247782.1 other downstream 1529771 14299701 ~ 14343274 (+) False si:dkey-151g10.3
TU233368 other downstream 1914060 14683990 ~ 14685316 (+) False LOC122328906
TU233419 other downstream 1942217 14712147 ~ 14714533 (+) True LOC122328914

Expression Profile