RNA id: XM_043224681.1


Basic Information

Item Value
RNA id XM_043224681.1
length 3538
RNA type mRNA
GC content 0.47
exon number 14
gene id kcnab2b
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12332606 ~ 12384111 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACTCAGCATTTATGCTTCTGCTCAGCGCACAGTGAGAAACATTACTGGAAGTTGATCTAAACCAGAAGACTGATTATGAAAAATGACTGTCAGTTAACGTTAGGAATGCCAGATGGACAACAATAAAGCAACCGACGAAAGTGGGGAATAACAAGGAGCAAGTCCACTTACAGTGCAGTCAGAGGAGAGTGGAGAAGAGCTTGATGTGCTGCAGTGTGACGTGGATGGATGTGGGATTTCTCCCCCGTTCTGTGTGTTGATGTGATTGGTGCCCAGAGTTCACCGCTTCACAGGCTGCTGCTGCCCCGGAGCCAGAGCACAGGAATTCACTCTCGCAGAGActagcgcacacacacgcaccgaGACACTTACAcgcatttcacacacacacagacggcaCATGGACAGATACATACTCTGGCAGTACTTCAGAGCGATAACTGCACTTGTGGGTTAAACAGAGTGTTGCACTCACCTTTTTGACAGCTGCCACATCCATTCTgaccttcttcttttttttcttaccacGTTTTCTtcaagtttacaaaaaaaaagtgactttcCTCTCTCCTCGTTGTCCTCAGGGCAGGAAGGCGCTTGTCTTTAGTTGTTGAGGTAACAGCATTCGGAGGTTTTAGGACTAGTTGCTCTTTGTAGCGTCAGCATCCTTGCCGTGGTAAAGCTGTCTGCGGGGGCTCGCCGTCAGCATGCAGGTGTCTTTTGTGTGCACGGACCACCGAGCTGTCAGCCGCAGCACAGAGGACCGACTGAACCGACAGAACACCAACAGCCCGAGTTTGGGGACCAAAAGCAAGTTTCGTGCTGTGGCCATGGTGGCCCGGAGCCTGGGCCAACTGTCTGTGCAGAACATGCCTTCCTCTGGTGACCACTGCTTGAGAACTGGCATGAAATATAGgaaccTTGGGAAATCTGGCCTACGGGTGTCATGTCTAGGATTGGGCACATGGGTGACATTTGGTGGTCAAATAACCGATGAGATAGCTGAGCAGCTGATGACGGTGGCGTATGAGAACGGTATCAATCTGTTTGACACAGCCGAGGTGTATGCGGCAGGGAAGGCTGAAATGGTTCTCGGCAGTATCATCAAGAAGAAAGGATGGAGACGTTCCAGTTTGGTCATCACCACAAAGATATACTGGGGTGGAAAAGCAGAAACCGAGAGAGGCTTGTCCAGAAAGCACATAATAGAAGGTCTAAGGGCGTCACTGGAGAGACTTCAGTTAGAGTATGTGGACGTAGTGTTTGCTAACAGACCTGACCCCAACACGCCAATGGAAGAGACGGTTCGAGCGATGACCCATGTGATTAACCAGGGCATGGCCATGTATTGGGGCACGTCCCGCTGGAGCTCCATGGAGATTATGgAGGCGTACTCAGTGGCACGACAATTTAACCTGATCCCACCCGTCTGTGAGCAGGCCGAATATCACATGtttcagagagaaaaagtgGAAGTACAGTTGCCAGAACTCTTCCataagattGGTGTGGGAGCCATGACGTGGTCTCCACTGGCCTGCGGAATCATCTCAGGGAAGTATGACAGCGGTGTGCCTCCTTATTCCAGAGCCTCTCTCAAGGGCTACCAGTGGTTGAAGGACAAGATCCTGAGTGAGGAAGGCCGCCGTCAGCAGGCGAAGCTGAAAGAGTTGCAGGCCATTGCGGAGCGGCTGGGCTGTACGCTGCCCCAGCTGGCCATCGCGTGGTGTCTGAGGAACGAGGGGGTGAGCTGTGTGCTGCTGGGGGCCTCCAGCACTGAGCAGCTGATGGAGAACATAGGAGCCATTCAGGTTCTTCCAAAATTAACATCATCAATTATACATGAAGTGGACAGTATCCTAGGCAACAAGCCCTACAGTAAAAAGGACTACCGGTCTTAAAAAGGAAAGCCAGTGACACTGTGTCGACCTGCTTCTTTCTCTGAGATCTGACTGAAAAAACATTGGCACATGGGACCAGCACTGTCACGGGTCCTGCAGGAGACGCCAACTTGCACACTACATGGAGTCTGCCGACATTAGCCTGATAGGAGGCCAAGAAGCGCACGGGCAGAAGGGAAGCATGCTCACGTACAAATCAGCTAGACCGGCTCAAAAAGCAGAACGCCGCTTCAAGAAACCACTGAAATCAAGCGCACCGGCTCGCTTCTTCCTCCCCTTTGAAGTAGTACAGTATTAGAGATCCAGAATTTGTACTTAGTCTAGAAATGCATGAGATCCGCTGGCCATGGCACATGCTCCCCTTCCCCCTACATTttggaaaacaaacacatttgcataCGCTCACAGGAAGTAGTGAAGCTGATGAAGCACTTTGGCGAATGCAGAAAGTTACATGACTTAATAGACTAATAAGGCATTGGATGTTACTAGTTTTACATCGAAATTGTTAGCCAATATAGTGCTTGTTTACAAGACCTCGTTTATACAAGCTACGTCATTTCaggctgtgtttttgttttaaacatagAACGGGAAGCTATCTTAGAGTtacacataataatatataaagctTGGGTTGTTAGACATGAAATAGCTACAGGCCTCAACAAATGTGCAatatttgaaagtgtttgtAAACcgactgttcttttttttctttttgcttttaaaaccgTTTTTAACCTCACAGACTATATAAGATTGACATACTGTTCATGTTGCTTAAGCTTACCAAACATAGACAGTAATATAGCAAATGAAAGCTTACGATTATTGATCTAACACAAAGAATAATTATCAAAAAGTATGTGGAAGTTCTGGGgaaaaaacaggcatttgtgTCACATTTTTGCTCCGATTAGTACTTGCCACAAACTTCATTATCAGCTTTTAGATGTTAACTTTAAATGATGCGTTAGTGATTAGTTTTGCCTTAACACATTTGTGTCGCCGTCGATTGCGTCATCACGTGATGTGTCGCGTGTAGGTCTCTGCAGGCAACTTAAAGGGAGTTACCAAACCATGGCGTTTTTTTACACCTTGTACCTGATTGGCTGACCTCGTAGTGAGGGTGGGTTTAGGTCATTTTGTTTGCATGATTGAGAAACACCCAGGGGTTTGAAAAGGCCCAGAAATTGAGAAACGCCCCCTTTTGCTCTGCAGAGGCCTTAATCTCCATACGTCTGAAAAGTCCACAATCACAGCTCTCAAAACACACGTTGATCGACATCCTAGCCCCACCGTTATCGACTTCTGCCTTTCCAAACGTGAGGGAGGAGGGCGCCCTGAGCTAGCCGCTCGATCCATACACAGTGGATCACGTTGGACTGAGAGCAAATACAATGATAATTAAGAATTATTCCACCCATGTGTTCAAATTGATGGCCTTTTGTGTAAAATGAGGcagtttttatcaatttaacCAAACTATGCAAGTATGGTAATGTTTTGAATTCGGGAATGCCCAACCTCTCAAAAATTGGAAAATAGAGACCCCCTAGAGGACACCACGTGACTCTCTACAAGGAAATTTTAAtaaccttttaaataaattattaaattaaggaTCCCCTTT

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232604 lncRNA upstream 106272 12246217 ~ 12251978 (+) False LOC122328708
TU232614 lncRNA upstream 112149 12245874 ~ 12246101 (+) True G157081
TU232612 lncRNA upstream 116849 12239849 ~ 12241401 (+) True G157079
TU232392 lncRNA upstream 152855 12204256 ~ 12205395 (+) True G156931
TU232866 lncRNA downstream 344933 12729044 ~ 12787715 (+) True G157265
TU232925 lncRNA downstream 469130 12853241 ~ 12853832 (+) True G157294
TU232954 lncRNA downstream 605690 12989801 ~ 13040412 (+) True G157317
TU232968 lncRNA downstream 722349 13106460 ~ 13106957 (+) True G157326
TU232971 lncRNA downstream 730847 13114958 ~ 13115174 (+) True G157329
XM_043224563.1 mRNA upstream 46996 12252725 ~ 12311254 (+) False pax7b
XM_043225281.1 mRNA downstream 56945 12441056 ~ 12449532 (+) True emc1
XM_043225282.1 mRNA downstream 56958 12441069 ~ 12449532 (+) False emc1
XM_043225176.1 mRNA downstream 66159 12450270 ~ 12490854 (+) True ubr4
XM_043225181.1 mRNA downstream 66159 12450270 ~ 12490854 (+) False ubr4
XM_043225182.1 mRNA downstream 66159 12450270 ~ 12490854 (+) False ubr4
unassigned_transcript_2622 other upstream 839714 11518465 ~ 11518536 (+) True trnae-uuc_33
unassigned_transcript_2620 other upstream 842379 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2619 other upstream 844404 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2618 other upstream 845552 11512625 ~ 11512698 (+) True trnan-guu_35
TU231904 other upstream 1181217 11174421 ~ 11177033 (+) True G156586
XR_006247901.1 other downstream 1670253 14054364 ~ 14054500 (+) True LOC122329331
XR_006247900.1 other downstream 1672574 14056685 ~ 14056821 (+) True LOC122329330
XR_006247782.1 other downstream 1915590 14299701 ~ 14343274 (+) False si:dkey-151g10.3
TU233368 other downstream 2299879 14683990 ~ 14685316 (+) False LOC122328906
TU233419 other downstream 2328036 14712147 ~ 14714533 (+) True LOC122328914

Expression Profile