RNA id: XM_043224772.1


Basic Information

Item Value
RNA id XM_043224772.1
length 1507
RNA type mRNA
GC content 0.59
exon number 10
gene id adrm1
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 6708712 ~ 6713207 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtcgtcggaTCAGCGGCGGCGCGATTcgttgacacacacacacacacacacgcgtgtgAAAGAAAACGCGCAGTCATTGTCGAAGTGGCGGCTAACGCTAATCGAGGGAAGCGTTTCGGGAAGCCAAAGGAGCAAAAATAGGATCGTAGTTTGAAGCCGAGGGTGAAAGCGAGGCAAGGATGTCATCCGGAGCCCTGTTCCCCAGCCTGGTGTCGGGCTCCCGCAGCTCGTCCAGCAAATATCTGGTGGAGTTCAGAGCGGGGAAAATGAGCCTGAAGGGCAGCACGGTGACCCCGGACAAGCGCAAAGGCACCGCGTACATCCAGCAGACGGACGACTCGCTCATCCACTTTTGCTGGAAGGACAGGACGTCGGGAAACGTGGAGGACGATCTTATAATCTTCCCGGACGACTGCGAGTTCAAGCGGGTTAACCAGTGCACCACGGGGCGCGTGTACGTGCTGAAGTTCAAGGCCGGCTCCAAAAGGCTGTTCTTTTGGATGCAGGAGCCGAAAACGGATAAAGACGAGGAGTACTGTCGCAAAGTGAACGAGTACCTGAACAACCCACCCATGCCGGGCACGCTGGGAAGCGGAGGAGGCGGCGGCCACGAGCTGTCTGCACTTGGAGAAGGTGGTCTGCAAAGCCTCCTGGGTAATATGAGTCACAATCAACTGATGCAGCTGATAGGACCGACAGGACTGGGTGGACTCGGTGCTTTGGCAGGTCCAGGTCTGGCTGGTCTGTTGGGTAGTGGAGGTCCTGCTACCAGCAGCTCAACTTCGAGCTCCCGTAGCCAATCGGCAGCAGCCACTCCCTCGTCTGGCTCGGCCGCCCGCCTTAGCTCCACCCAGGCACCCACCACCCCCGTGACCCCAgccgccacctccagcggctcGCCCACGGTGACCCCCACCACCCCCGCCGCCCAGACTCCCTCCATGCCGGCGGGTCCCCCTTCCGGCACGCAGGCCATCCAGCTGAGCGACCTCCAGAGCATCCTGGCCACCATGAACGTGCCCGCCGTGGCAGCCGAGGGCCCGGGAGtgGACTTGGCGAGCGTGTTGAGCCCTGACGTGATGGCTCCTATTCTGGCGAACCCTGAAGTGCAGCAGAGACTTGTGCCGTACCTGCCGTCTGGAGAATCCCTCCCTCAGAGCGCCGAAGAGATCCAGAGCACCCTGACCTCTCCGCAGTTCCAGCAGGCCATGAGCATGTTCAGCAGCGCTTTGGCATCTGGCCAACTCGGTCCTCTCATGAATCAGTTTGGTTTACCCTCTGAAGCTGTGGACGCGGCTAATAAAGGAGACGTAGAGGCCTTTGCCAAGGCCATGGAGGGCACTGACGCAAAGACTGATGACGGAGATTCCAAAGACAAGAAAGATGACGACGAGGACATGAGCTTGGATTAAAAGGATGCTGCTCTCGCAACACTCCAGCTTGTTTGCGTCTGCGCTTTCATGTGTTTTGTATGCTCACAGCTAAACCATTAAACTATCGACTCTCA

Function

GO:

id name namespace
GO:0010950 positive regulation of endopeptidase activity biological_process
GO:0043248 proteasome assembly biological_process
GO:0005634 nucleus cellular_component
GO:0000502 proteasome complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0061133 endopeptidase activator activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU230208 lncRNA downstream 83444 6624419 ~ 6625268 (-) True G155443
TU230195 lncRNA downstream 96188 6611993 ~ 6612524 (-) True G155435
TU230127 lncRNA downstream 194619 6509715 ~ 6514093 (-) True G155392
TU230121 lncRNA downstream 208963 6488624 ~ 6499749 (-) False G155391
TU230119 lncRNA downstream 219868 6485439 ~ 6488844 (-) True G155391
XR_006247875.1 lncRNA upstream 81408 6794103 ~ 6804919 (-) True LOC122328996
TU230288 lncRNA upstream 122680 6835375 ~ 6835589 (-) True G155508
TU230378 lncRNA upstream 124434 6837129 ~ 6838566 (-) True G155578
TU230388 lncRNA upstream 216991 6929686 ~ 7067824 (-) True G155586
TU230389 lncRNA upstream 350883 7063578 ~ 7067824 (-) False G155586
XM_043224003.1 mRNA downstream 106629 6598718 ~ 6602083 (-) True slc16a7
XM_043224004.1 mRNA downstream 106640 6598718 ~ 6602072 (-) False slc16a7
XM_043224005.1 mRNA downstream 106649 6598718 ~ 6602063 (-) False slc16a7
XM_043225070.1 mRNA downstream 186868 6515811 ~ 6521844 (-) True zgc:171775
XM_043224781.1 mRNA downstream 250793 6454153 ~ 6457919 (-) True krt18a.1
XM_043224767.1 mRNA upstream 664 6713359 ~ 6721570 (-) True osbpl2b
XM_043225142.1 mRNA upstream 92674 6805369 ~ 6819843 (-) False acss2
XM_043225143.1 mRNA upstream 92674 6805369 ~ 6819843 (-) False acss2
XM_043225141.1 mRNA upstream 92674 6805369 ~ 6819843 (-) True acss2
XM_043224020.1 mRNA upstream 108241 6820936 ~ 6823032 (-) False rps21
TU229892 other downstream 1228893 5477914 ~ 5479819 (-) False LOC122329286
TU229887 other downstream 1253665 5454417 ~ 5455047 (-) True G155227
TU229703 other downstream 1874192 4831818 ~ 4834520 (-) False LOC122329181
XR_006247892.1 other downstream 2513714 4173914 ~ 4194998 (-) True LOC122329268
TU230261 other upstream 18156 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 53913 6766608 ~ 6822978 (-) False rps21
TU230273 other upstream 60883 6773578 ~ 6822978 (-) False rps21
TU230275 other upstream 60883 6773578 ~ 6822978 (-) False rps21
TU230277 other upstream 60883 6773578 ~ 6822978 (-) False rps21

Expression Profile