RNA id: XM_043224808.1


Basic Information

Item Value
RNA id XM_043224808.1
length 6808
RNA type mRNA
GC content 0.51
exon number 33
gene id plcg1
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1952150 ~ 1980965 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTATTTCCCACACTTCCACGCAGCGTCTGGAGAGCGGCGCTGTGTCTTTAAGAGGCCGAGCCTCGCCGCGCCGCGCCGCGCTGTAGGGATCGGCTGATGGGGGAAGGGCTCTGGCTCTGGCTCTCGCTCTCGCACTCATGGCGGAGAGCAGACCTTTCACCGCCGCTGCCGCCGTCGCCGCCGTCGCCGCTCGGATCCGCCAAACCCGCGTCTGATCAGGGGCGACAGGACGACATGAGCGCTGCTGAGATCGCGGACAGACTGCGCGTTGTGTTTCTGATTTTACCGAGTCCGAGAGAGCCAGCTGCGTCCGTACACGGTGTCCTCACCGGGCCTGGGAGGCTGTGAGTTATTCGGAAAGGAACTGAAGAACAAACAGGGGAAATGGCTGCGACCGCTGGCTTCTCCTCCAATGGACCCGTACCCTGGACGCTGAGCGACACCGAGGTGAACAATCTCTACCGGGATCTGGAGCTGGGCACCGTTTTGACTCTTTTTTACTCCAAAAAGTCCCAGAGGCCGGAAAGGAGGACGTTTCAAGTCAAGCTCGAGACCAGGCAGATCATCTGGACGAGGGGAACGGATAAAATCGAGGGCGAGATTGATATTCGGGAGATTAAAGAGATCCGCATGGGTCAGAAGTCACGAGACTTTGAGCGTTATGTGGAGGACTCGACCGCCCGACCCGAACAGGCCTACTGCTTCGTCATCCTCTACGGCACTGAGTTTCGGCTCAAAGCACTCAGTCTGGCAGCCACCTCAGATGAGGAGATGATGATGTGGGTGAAGGGCTTGAACTGGCTGGCGACCGATACGCTAAGCTCCCCCACACCCCTGCAGATAGAgagGTGGCTGAGAAAACAGTTTTACGCAGTGGATCGTAACAGAGAAGACAGAATTTCCTGTAAGGATCTGAAAAGCATGCTGTGCCAGGTCAACTACAGAGTTCCCAATATGAGGTTCTTACGAGAGAAACTTCCGGACGGAGAGCTGAGGAATGGAGATGTATCTTACAGTCATTTCGCCCAGTTGTACCGCAGCCTGATGTTTGACGCGCAGAAATCAaTGGAGATTCCACTGCTGCAGAGGCTTATTGAGAGACCGGAGCAGAAGATCTCACTGGAGGACTTCCAGAGCTTCCTGATCGAACACCAGAAGgAGCTCTGGGCTACAGACAATAACAAGGTGCAGGAGTTCATGTTCCACTACCTGAAGGATCCTCTGCGAGAGATCGAGCAGCCTTACTTTCATCAGGACGAGCTGCTCACGTACCTGTTCTCAAAAGAGAACACTATCTGGGACTCAGAGCTTGATCAGGTGAGGCCGGAGGACATGAGCAACCCCCTGTCCCACTACTGGATCTCCTCATCCCACAACACCTACCTGACGGGAGACCAGTTTTCCAGTGAGTCGTCTCTGGAGGCGTACGCCCGCTGTCTGCGCATGGGCTGCAGATGCATCGAGTTGGACTGCTGGGACGGTCCTGAAGGGATGCCTGTTATCTACCACGGTCACACCCTCACCACCAAGATCAAGTTCAACGATGTGCTTAACACCATCAAAGAACATGCCTTCGTTacgtctgaCTATCCCATCATCCTCTCCATCGAGGACCACTGCAGCATTGTCCAGCAGAGGAACATGGCCACCTTCTTTAAGAAGGTGTTTGGAGAAATGCTCCTGACGAAAGCGGTGGACATCTCCGCCGACGGTCTCCCTTCGCCCAATCAGCTCAAGAGGAAGATTCTGATCAAGCACAAGAAATTAGCCGAGGGAAGCGCGTACGAAGAGGTCTCGTCTTCAACGCCCTACTCTGAGAACGACATCAGCAACTCCATCAAGAATGGCATCCTGTACCTGGAGGATCCCATCAACCACGAGTGGTATCCTCACTTCTTTGTTCTGACCAGCAATAAGATCTATTACTCTGAAGAGACATCCAGTAATCAAGGGAACGAGGATGAAGAGGAGCACAGAGAGATCTGTAACGGCATGGACCAGCACGTGACGGAGAAGTGGTTTCACGGGAAACTGGGAGCGGGACGTGACGGGCGTCAGATCGCAGAACGGCTGCTGTCGGAGTACTGTCTGGAGACCGGTGCGCCGGACGGATCCTTCCTGGTGCGGGAGAGCGAGACCTTCGTGGGCGACTACACTCTCTCCTTCTGGCGGTCCGGTCGGGTTCAGCACTGCAGGATTCACTCTCGGCAGGAAGCCGGCAGCCCCAAGTTCTACCTGACGGATAACCTGGTGTTCGACACTCTGTTCGCCCTCATCACACATTACCAGCAGGTGCCTCTGCGCTGCAACGAGTTTGAGATGAAGCTGACCGAGCCGGTGCCTCAGACCAACGCTCACGAGAGCAAAGAGTGGTATCACGCGTCCCTGTCCCGGAGTCAAGCGGAAAACATGCTGATGAGAGTCCCGCGTGACGGGGCTTTCCTCGTAAGGAAGAGAACGGAAGTCAACTCGTTCGCCATTTCCTTCCGGGCCGAGGGCAAGATAAAGCACTGCCGCGTGCAGCAGGAGGGGCAGACCGTGGTGTTGGGCACCTCCGAGTTCGACAGTTTAGTCGATTTAATCAGTTACTACGAGAAACATCCGCTGTACCGGAAGATGAAGCTGCGCTACCCCATCAACGAGGAAACACTGGAGAAGATCGGCACCGCTGAGCCTGATTATGGATCTCTGTATGAGGGACGTAACCCTGGGTTTTATGTGGAAGCCAATCAGATGCCCACGTTTAAGtgcacAGTACGAGCCATGTACGAATACAAAGCCCAGCGTGATGATGAACTTTCCTTCAGTAAGAACGCCATCATTCAGAACGTGGACAAACAGGAAGGAGGCTGGTGGAAGGGAGACTATGGAGGGAAGAAGCAGCTGTGGTTCCCTGCGAATTACGTTGAGGAAATCAGCCCGACAGCCGTGGAGCCCGACCGATCACAGGCTACAGAGAACAGTCCTCTGGGAGATCTCCTGAGAGGAAGTGTGGACGTGTCTTCCTGTCAGatcgTGGTCCGGCCCGAAGGGAAGGGCAGCAGACAGTTCGTCTTCTCTCTGGTGCCTGTGGCTTCGCCTCGCACCGGCCCGGTGCTGGACATCGCCGCCAGCTCACAGGAGGAGCTGAAGGACTGGGTGGTGAAGATCCGCGAGGTCACCATGACCTCTGAAGCCAAGCTTGAGGAGGGTAAAATGAtggagagaagaaagaagatTGCTCTCGAGCTGTCGGACCTCGTCATCTACTGCCGACCGGTTCCTTTCGACGAAGACAAGATCGGAACGGAGAGGGCCTGTTTCCGGGACATGTCCTCGTTTCCCGAGACCAAAGCGGAGAAGTACGTGAACCGAATCAAAGGGAAGAAGTTCCTGCAGTACAACCGCCTGCAGCTCTCTCGGATCTACCCCCGAGGCCAGCGCCTGGACTCGTCCAACTACGACCCCTTACCCATGTGGCTGTGCGGCAGTCAGCTGGTGGCCCTCAACTTCCAGACCGCAGATAAGCCCATGCAGATGAACCAGGCGCTCTTCATGCTGAACGGCAAGAGCGGTTACGTGCTGCAGCCGTCCATCATGAGAGACGACAGCTTCGACCCGTTTGACCGGCACTCTCTGAGAGCAGTGGAGCCCATCACGCTCAGCATAGAGGTTTTGGGAGCGCGCCACCTGCCCAAACACGGCCGAGGTATCGTCTGCCCTCTCATCGAGATCGAAGTTTGCGGAGCAGAATATGACAACGCCAAGCAGAGGACTGACTCTGAAGCGGACAATGGTCTGAACCCCACCTGGCCCAAAAAACCCTTCCGGTTCACCGTCTGCAACCCTTCCTTTGCCTTCCTGCGCTTCGTGGTCTATGAAATCGACATGTTCAATGACCAGAACTTTCTCGCCCAGGCAACGTTCCCCATCAACTGCCTCAAAACAGGCTACCGGTCGGTCCCGCTGAAGAACAGCTACAGTGAGGATCTGGAGCTGGCGTCTCTGCTGGTGCACATGGACATCGTCAGAGGACGGCATGAGAACGGCGAGATGCTCAGTCCGTTCTCGACGGCGGGGGCGATGGCCATGGCCATGCAGGTGGGCCGGGAGCGGATGGGGGACACCAGCTCCACCTCTTCCACGTCCTCCATGTCCCCGCTGCCCTCGTCCCCGGGCCAGGCGCTGGGGTATCGCGGCCGGGAGGGCTCGTTCGAGGCCCGCTACCAGTCTCCGCTCGATGACTTCAGAGTGTCCCAGGAGGCGCTGTTGGACCACGAGAACAGGAGGCTCCGCAGGGCTCGCGTCAGCGCTGATAACCGAGCGTAACCCGGTCGGCCGGGCGTGCGACGGACGGACGGAGCGAGCGACGCAAGGCCAGCGACAAGGGTCCCACAGAGCTGATGATGTCAAGGACTGCCGTGAAGCCGCTTCTGTGGAAACCGTCATCGCTGGCGTTTTCGGACAGATCTTCCTCTCTCTGCGAGTCTCTCCCGCTCCGGGCCGCGTGAGGGGGGGGGGAATCAACGGAGCTGCGGCTCACGGACAGAAACGAACAATTATCTGCTTGGCTACAATCTGAACCTGCGGCGGACGGGACGGGGGTGTTCTGATGCGGCGCGAGACTCAAGGACAAGGCCAATGTTTCAAAATTGAGTGGGGGCTGTATCATTCATCACTTTGAAACCGATTCCAGGTTAACAATTATGGAGtaataatactttttctttactctgtctctctggcttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaatgtgtgtgtgcgccccATGTTGCTGTCGGTTAGAAAAGCGTTGCAGCTGATCTGCTCTCAAAGAGCCTCTCACTccagatttttgtatttcatttcagatcgattatttttattatttaaacgtCTGTTTcgtaatgttgttttttttctactcgTTTTAACATGAGGGCTTGGCCTTTTTAATTGCGTTTTTCGCCTCTCTCTTCCCTCTTTCCGAGTTACTGGACTGAACACGTCCCAGGATGCTCTTGCGTTTCGTGTTTTTTGGCACAGGCAGATGGCAGCGTTGAAGACCTCATCGAAGCGTCCGCTGTCTGAGCATCAGGAAGGCGTTCTTCGACATTTACcaacttttatttagttttaatatacaGTTACGACGTTATCAAGTGACCAGAGAGCAATATCACTCTCCTTGTTTTATGTTGTGCCAGTCTGCACAGGTGGACTTGAATTCACAAACAGCTCAGGTGGGGGTTTTCAGGCTACGGAAGCATCAGAAACATTGTGTATTTAGTTTACAAGACTTGGACCATCTCATTTCAGAACGTTTTATCCCTCTATCACCGTTTCTGTCGTTTAGTCACCGTTTCTCCACATTTCAGCAATTGAGAAGTCTTGTTCCTGAAGGCTTTTTATcgtttttgtctttaaataggGAGGACGTTTTATGTGCGATTTAGTAGCGTGTTAACCATGATGTCTGTTTGAAGAAAGCCAAAGGTAGATTGTGCAGGTGGTTCATACAAAAAATTGGGACCAAAATAAGTCCGTCTCAGTTCATTGGGTTACAAAGTAGAGAATATatggatgttttgttttttcttctgtggacaGGAGTAAGGGCATtttggtcagttttttttttaagatgtataCCTTGTTCCAAGCTGTCATAGTTTTGTGTTATGCCATATTATTGCTAAAATACAGATTGTAATTGATTGATAACCGGCTAAGACTGATGAGTTAGATTAGAGTtgatgtacagtaaaaacaaggCCATATTTATTGTAGCTCTGATAAGTTTCATGCATTCTCTTGTTTAGCCAGTAGAGGTTGAGATGTTACCAAACTGCACACGTACACATGCCATCGATTTCTGCAAAACATTTAGTGTCTAACAGCCATATAAGAAGCCATTGTGATGctgttgcattatttttctgtcaCTGATGCTTTACCTTGCTCTCCGTTTGACCATGGGGTCCAGATGTGTTTATGGAGCAGGGTGACCAAGGAAAAATCATCTGACATTTTCTTCCCCCCTTTTGTTTGCCTTGTGGCTGCTATGTTATGGCAGTATTGTCACAGTATTTATTTGGTTCTGTGCATGACAGCTCAGAGTCTGCTCCACAATTAACTCCTCAATTTCCCCAGACTGGGCACCTACAGGAATGCTAACTCATTAGAAAGTTGGGGCATTTTAACATGGAGGGATGTGCAATTCGAGCAACCAGCTAGCGCCTTTGGATGCATGTGTAAGTTTTCATTCCTCTTTTTCTAGTGTATAGCAAATTGCATTATGCAATCTAGAAATATTACAGAAAGACACAGGGACCATAATCACTTCCTGAGCTCTGAGAGGAAAAGACATGGCCAAACTCCTTCAGAGGGAATTCACTCAAGTTCCCTTGCATTAATTCCTAATTAGCCAACATTCCCTCAATTTGTTTTCAGTGTTAATCCCTTTCCTTGTACTTCTGTAGCCCCTCTCCAGTCTGTAAATTAGTTTCTGCTGTCTTCTTGCATCATCTTTCATGTGCCTtggtgtatgtatacatatatacatcaaCGAAAGATTCCCTGTCGGACATGTATGCCTTTTTCTATGCTTTCTTGCATCAGCATTTTGTTACCAATGTTCTTATTTACAAACCAAGCCTTTTCTGTAACGTGCCTATGCTATATTGGAGGaagtatgttttaattttgcttttcaTATGAAACATAATCAAGCCTGAGAATAAAGTACTTATTCAACAATAAAAA

Function

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0001525 angiogenesis biological_process
GO:0048844 artery morphogenesis biological_process
GO:0009395 phospholipid catabolic process biological_process
GO:0060218 hematopoietic stem cell differentiation biological_process
GO:0001570 vasculogenesis biological_process
GO:0031101 fin regeneration biological_process
GO:0008016 regulation of heart contraction biological_process
GO:0030851 granulocyte differentiation biological_process
GO:0035477 regulation of angioblast cell migration involved in selective angioblast sprouting biological_process
GO:0004871 obsolete signal transducer activity molecular_function
GO:0004435 phosphatidylinositol phospholipase C activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU228138 lncRNA downstream 143145 1808555 ~ 1809005 (-) True G154077
TU228125 lncRNA downstream 236179 1715243 ~ 1715971 (-) True G154064
TU228122 lncRNA downstream 240108 1711732 ~ 1712042 (-) True G154061
TU228119 lncRNA downstream 244695 1707139 ~ 1707455 (-) True G154058
TU228118 lncRNA downstream 245555 1706275 ~ 1706595 (-) True G154057
TU228319 lncRNA upstream 65360 2046323 ~ 2046544 (-) True G154188
TU228325 lncRNA upstream 96601 2077564 ~ 2079496 (-) True G154194
TU228327 lncRNA upstream 111785 2092748 ~ 2095915 (-) True G154195
TU228334 lncRNA upstream 115821 2096784 ~ 2097008 (-) True G154200
XR_006247848.1 lncRNA upstream 118291 2099254 ~ 2102158 (-) False LOC122328884
XM_043225481.1 mRNA downstream 12760 1936124 ~ 1939390 (-) True rab5if
XM_043225328.1 mRNA downstream 17312 1923187 ~ 1934838 (-) True dhx35
XM_043225331.1 mRNA downstream 301040 1645987 ~ 1651110 (-) False spata2
XM_043224813.1 mRNA upstream 1686 1982649 ~ 1996005 (-) False top1b
XM_043224812.1 mRNA upstream 1686 1982649 ~ 1996005 (-) True top1b
XM_043225363.1 mRNA upstream 17736 1998699 ~ 2003597 (-) True zgc:114123
XM_043224386.1 mRNA upstream 23368 2004331 ~ 2017858 (-) False ncoa6
XM_043224389.1 mRNA upstream 23368 2004331 ~ 2017858 (-) False ncoa6
TU228042 other downstream 439821 1507810 ~ 1512329 (-) False smim29
TU228038 other downstream 439859 1507698 ~ 1512291 (-) True smim29
TU228039 other downstream 439859 1507810 ~ 1512291 (-) False smim29
TU228037 other downstream 439859 1507885 ~ 1512291 (-) False smim29
TU228040 other downstream 439859 1507885 ~ 1512291 (-) False smim29
XR_006247837.1 other upstream 121747 2102710 ~ 2116883 (-) False LOC122328833
XR_006247839.1 other upstream 790444 2771407 ~ 2782853 (-) False LOC122328838
XR_006247842.1 other upstream 806333 2787296 ~ 2798533 (-) True LOC122328849
TU228731 other upstream 944085 2925048 ~ 2957272 (-) True G154446
TU228725 other upstream 944566 2925529 ~ 2951628 (-) True G154445

Expression Profile