RNA id: XM_043224871.1


Basic Information

Item Value
RNA id XM_043224871.1
length 3031
RNA type mRNA
GC content 0.58
exon number 21
gene id rbm10
representative False

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 2995169 ~ 3010017 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTGTTCGTGTCAGTGTGTTTTAAGCCAATCAGCCGGAGAGAGGTGTCCCCGCCTCCCGGACCGAGGCCATCTTACGCCGGGCTCCGCTGTGGCGCGGCGCACACATACGCCGTATCGGTTTCAACGCTGCTGGCGGGGCAGAGCAAATGAAGCGGGCAGAGAGGAAAAGTGGGCGTTTCTGACGACTTGCAGTGAAGCATGGATTACGAGAGGAGGGGCGGTCGTGGAGATCGGATGGGCCGCTATAGGAAAGATTCTGACGATCATGACTATAGGGACATGGACTATCGCGGTTACGGGCAAGAAAATAGACCGAATAGCAGTTTAACAAACGTAAGACCGCAAGAGCCCGATAGTAGTTTTGAAGGCATGAGAGACTTTGCCTCGGGTAACTTTTCGACTAACCGACCCGGATTCAGACAAAAGGGAAACCACGGATCCGAAAACGGCCCACTTGGAAAAAGCCTCCTCCAAAGTCCCCCCAATGAGAATATCCACTCGGGATTCCAGCAAGACGATAAGGATTATGAGTTTGAGCCAGAGACGAGTGCGCACAGGACGTATAGATCAGGACAGAAGGTCTATCTGGATGAAGGGACCCCGGATGAAGGTGAAGAAAACGAGGACGACGCCTGGGGCAGAGTTAGAGGGCGGCACGACTCTCAGGGCGAATACGGTGCAGAATGGAGAGCTGAGGAAGACAAACACGTCAGACACGCGCACAAACAAGGGTTTCCCGATGAATCTCAACTAGCTAGGGACAAAATAAGAGACGGAAGGTTTCATCCCGCTCTGGAAATGTGCCAGGAGGAGGCCGAACCCCGCGACCAGGACTACAGGTCTGATACGGAGCAGGTCCAAAAACCCAGCAACATTGTCATGCTGAGAATGCTCCCGCCAAATGCAACCGTTAACGAGATTCGGGCTCGACTGCAGGAGCAAGGGATCCAGCCCAGAGAGGTTCGCCTCATGAGGAACAAGTCTTCAGGTCAGAGCAGAGGATTCGCCTTCGTCGAGTTTAATCACTTGCAGGAGGCCAGCCGCTGGATGGAGACCAACCAGagagttctcACTATATTGGGACAGCGTGTATCCATGCACTACAGTGACCCAAAGCCCCGCGCAAACGAAGACTGGCTGTGCAATAAGTGTGGAGTACAGAACTTCAAACGAagagaaaagtgttttaaatgcgGAGTTCCAAAATCAGAAGCCGAGTTGAAACCGCCTCTGGTGCCAAAGAGTTTACCTCTGGGGCAATTAAAGGACTCGGCTCGGGGTTTACTGCCCCTTCCTGCCATATACCAGACAGCAGCTCCACTTATCAACTTGAGCTCCTCGTCCCCGGCTGCCGAGGTGGCCAACGACAGAGGCTTCGCAGCTGCTTCAGATCCTCCAGTCCCTGCAGCCTCCTCTCTCTATCGATGGGAAGCTCATCTCTGTGGAGTTCGCCAAGGGCTCCAAACGcgACGTTTTCCTGACGGACGGGAATCGGGCGAGTGTGGCGACGGTAGCGAGTACAGCTATAGCCGCAGCTCAGTGGGCCGTCACTCAGACGTCCCAGCTGTCGGCTGCGGCTCCGGCGCTGATCTGTGTGCGCACCAGCAGGGGGCGGCGGCGGCGGCCGCGTTCGGGCAGGAGGCCGCGCAGCTTCTCGGCGCAGACGCGCCAGCCTTTAAAGGGCCGGCGTCTGCGCCGCCGAGCGGCCGCGCAACGTTACGGGCTCCCGacggaggaacggcccccccggGTATAAGGGCAGCTTCAGGAGAAGCGGGCGCTACGTCCGTACCGTCCCAGACCCAGCGCGTCACGGCTCCGACCTCCACGCAAGCCCAGCAGGCCCCGGTGGAGATTGTTGGGAAGCCTCGGCCCGCGACCCCGAACCAGCCTGCCACGCCTGGAACCGCTCTGGAGTGCCAGCAGTACCCTGATCCCGACGTGTCCACGTACCAGTACGACGAGAGCTCGGGCTATTACTACGACCCTCTTACAGGCCTCTACTATGACCCCAATTCACAGTACTACTATAACCCCCATACGCAGCAATACATGTACTGGGATGGGGAAAGACGCACGTACGTTCCCGGCCCGTCACGGACGtccgacgacgacgacgacggcGGCACGGACGGCGCGAGCTCCGAGCTCCCAGGCGCTCCCAACGGCGGCAAGGACAAGAAGGACAAGCCCAAGAACAAGACGGCACAGCAGATCGCCAAAGACATGGAGCGGTGGGCCAAAAGTCTGAACAGGCAGAAGGAGAACGGGCGAGCGAGCGGCAACTGTCGAGCGACGACGCCGGGGAGGCCCGACGAGCGGCGGGAATCTGCCAGCGCCGACGCAGGCTACGCCGTCCTGGAGATGAAGGGCGCCTTGCTGGAGAGAGCTCAGATTGCGACGGAGCAGATGAAACATGTGGAAGAAAGAGAGAGTCCTCCTCGGGGTCTGGCGGCGGGATACAGCGGAGAGACGGACAGCGAGGAGGAGgccggagagagagaggagaggctGACGGACTGGTCCAAATTGGCCTGTCTGCTGTGCAGGAGACAGTTTCCCAGCAAAGAGGCTCTGATCAGACATCAGCAGCTGTCGGAGCTCCACCGGCAAAATCTGGAGCAGAGGAGAGCGAGACAGAGTCGATCGGAGCCACAAGAGCGGTCGGAAACGGAGCTGAAGTACAGGGACCGGGCGGcggaaagaagagagaaaggcTCCGTCCCGCAGGCACCGGAGGCCAAAAAGAGGAAATTCAGTCCCACCGGAGCGGGATGCGTCCCCGGAAGGATTTTCAATCACAGCCTGTTGGCGGAGTGACGTGAGGTGAGGCCTGTGGAGTTGTATCGGTGCGGTGCGGAGCGTGAGCAGAGCGCACCTGAGAGACCATCGTGAAGAGGAGAGCGATGTGCGgcgaaatatatatatatatgaaatgtctgtgtgtgagaaaagCTAAGAGATTGTGGTGGATTGTGAGGAAACGGCTCAGGACTTTGAGAAATCACAAATAAATTGCACAGTGTATACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU228686 lncRNA upstream 38035 2947774 ~ 2957135 (+) True G154425
TU228683 lncRNA upstream 45712 2945990 ~ 2949458 (+) False G154424
TU228692 lncRNA upstream 52602 2925579 ~ 2942568 (+) False LOC122329169
XR_006247846.1 lncRNA downstream 1164 3011181 ~ 3021971 (+) False LOC122328882
XR_006247845.1 lncRNA downstream 5175 3015192 ~ 3021971 (+) True LOC122328882
XR_006247847.1 lncRNA downstream 39381 3049398 ~ 3051276 (+) True LOC122328883
TU228786 lncRNA downstream 84234 3094251 ~ 3097035 (+) False mitfb
TU228801 lncRNA downstream 102505 3112522 ~ 3113171 (+) True G154487
XM_043224938.1 mRNA upstream 1815 2989515 ~ 2993355 (+) False rhoac
XM_043224939.1 mRNA upstream 1815 2989671 ~ 2993355 (+) False rhoac
XM_043224940.1 mRNA upstream 1815 2989778 ~ 2993355 (+) False rhoac
XM_043224937.1 mRNA upstream 1815 2990141 ~ 2993355 (+) True rhoac
XM_043224924.1 mRNA upstream 6154 2983340 ~ 2989016 (+) False LOC122328866
XM_043224912.1 mRNA downstream 50492 3060509 ~ 3096180 (+) False mitfb
XM_043224913.1 mRNA downstream 55131 3065148 ~ 3096180 (+) False mitfb
XM_043224911.1 mRNA downstream 60889 3070906 ~ 3096180 (+) True mitfb
XM_043224941.1 mRNA downstream 123514 3133531 ~ 3137978 (+) True twist3
XM_043224877.1 mRNA downstream 309424 3319441 ~ 3352334 (+) True LOC122328845
TU228680 other upstream 38445 2948916 ~ 2956725 (+) False G154424
TU228663 other upstream 38445 2955085 ~ 2956725 (+) False G154424
TU228682 other upstream 44081 2948916 ~ 2951089 (+) True G154424
TU228661 other upstream 47458 2945990 ~ 2947712 (+) False G154424
TU229052 other downstream 684635 3694652 ~ 3696638 (+) False ube2t
TU229053 other downstream 684635 3694652 ~ 3696638 (+) False ube2t
TU230095 other downstream 3582589 6592606 ~ 6594735 (+) False si:ch211-220i18.4
TU230359 other downstream 4215977 7225994 ~ 7238919 (+) True G155561
TU230347 other downstream 4289262 7299279 ~ 7304358 (+) False tcea2

Expression Profile