RNA id: XM_043224951.1


Basic Information

Item Value
RNA id XM_043224951.1
length 2257
RNA type mRNA
GC content 0.44
exon number 14
gene id idh3g
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14286961 ~ 14293566 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCGGAACCTTTCTCCAAGAGTCGGTGTTTAGTCCGGAACACAACGCACACGTAGACTGCTGTCATGATGGCCACTCTTACTAAAGCTTTAAAACCGATTTTGGGAAGGCAGTTGGGAAATACAGCAAAGGTTTTTGGCGCAGCAGTCAACAGTCAAAGAGGAAAGCCTACATACACAGGACGAATCATACCTCCTCCTGCCAAGTATGGAGGTCGGCATACTGTAACATTGATTCCTGGAGATGGGATCGGACCGGAACTGCTTAACCATGTGCGGGAGCTCTTCAGGTTCAGCTGTGTTCCTGTGGACTTTGAGGTGGTGCATGTGAATTCTGCATCAACCAGTGAGGACGACATCAATAACGCCATTACGGCCATTCGCCGCAATGGAGTTGCTCTTAAAGgtaACATTGAGACTAACCACGTAATGCCCCCTAACCACAAATCACGGAACAATCTTCTACGcacgAGTCTGGATCTGTACGCCAATGTGATGCACTGCCAGTCACTTCCTGGTGTTCAGACGCGCCACAAAAACATCGACATCATCATCATTAGAGAAAATACAGAGGGCGAGTACAGCAGTCTGGAGCATGAGAGCGTATCAGGAGTTGTAGAGTGTCTGAAAATCATCACACGGAACAACTCCCTCCGCATCGCTGACTATGCCTTCAGACTGGCCCGAGAGAAAGGTCGCCGCAGGGTCACGGCTGTCCACAAGGCTAACATCATGAAACTGGGGGATGGGCTGTTCTTGCAGTGCTGTAAGGAAGTGGCCTCTGGATACCCAGACATTGAGTTTGATAGTATGATTGTGGACAACACCACCATGCAGcTTGTTTCCAAGCCCCACCAGTTTGATGTCATGGTGATGCCTAACCTCTATGGCAATGTGGTCAGCAATGTGTGCGCCGGGCTGGTGGGTGGACCCGGGCTGGTGCCTGGTGCCAACTACGGGCGAGACTACGCCGTGTTTGAAACGGCCACCAGGAATACAGGAAAGAGCATTGCCAACAGGAACATTGCCAACCCCACTGCCATGCTGCTTGCCAGCTGTCTCATGTTAGATCATCTCAAACTCCATGACTACGCCAACATGATCCGCGGTGCGATCCTTACCACCATGAACGAGACCAGGTTGCACACAGTTGACATTGGGGGTCAGGGCACTACCTCAGAAGTGGTCCAGTCTATCATGAGGCTCATCCAGAGCAGCGGTCCCCTCACCACTGAGATCTAAACCCAGCCTGCACCACTCCACCACTGTTTGACATCAGCTACTTAAGGACATCTGCACTTCATTTTATGTCTCAATAATGTTGCTTCCACTTGAGACGAGAGATTTATTCTTGAATCCAGCAGCTTTTATGGGGATCTGGGGTGAAGATGGTGTTACGTGAAACACAACTTACTTCAGCGCTGTGATTGTGGTGTTTCTTGGGCATAGCGGTCTCTCCATGGGTTTTTAGATTTATCATTTTGTATGTAAAAGGTTATATTGTTTCAATGCTATGCTAATGCAGTATTTATGATGAGGGTCTTGCGTTGGATTTGTGTTTCTGCTGCTCAGTTGCATTCCACATTTTATCCATCTTACCTGTTATTCTCAAACCTTATaccttttttgtttactttaatgACCCTGAACAAAGCTCCAACTGGccatttacataattacattatacTTGTATAAACTACAgcgttttactttttttttttaactgcctTAAACTGTTGGGTGTTTAAATGGACTTCCTATTCTGGATGTCTATGAGATGGTATTTTTCTTTAGACTTTATGCTGGGGTATTTATGATTAATACTTAATGTTGGTCTACTGTTGCATCAGTAAGTTTGGACGTTTATGTTTTAGTTCTGTCTGTTCTGCAGTGCTTAAACGTATTTGACAAGTCTGCATCTGGCATGCTGTCATCttttgcattaaacattttccaACAGTTTTTCAGATTGGTATTAGAATATTGTAAAGCTGCGGGTCTCAACCTTTTTGCATCAAGACTACCACTATCCcatattcagttttattacatttttaattttctgataAAATATATCACAACTTGGAATAAACAGACCAACGTATATACAATGTGTGACTTTTACAGGTCtagaaatcacatttttaacgTTTTAATTGTACACTGGTTGAGAAAGGGTTAAAATTTGGACTGTTGCACAAATCCTTAATGGCTCACTGGTAATCCAGAGATATAATAAAATGGTTGTCctcttaaaaa

Function

GO: NA

KEGG:

id description
K00030 IDH3; isocitrate dehydrogenase (NAD+)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233804 lncRNA downstream 43006 14242581 ~ 14243955 (-) True G157885
TU233794 lncRNA downstream 49947 14236352 ~ 14237014 (-) True G157880
TU233765 lncRNA downstream 61567 14222809 ~ 14225394 (-) False zbtb48
TU233789 lncRNA downstream 143031 14143662 ~ 14143930 (-) True G157875
TU233788 lncRNA downstream 144793 14141939 ~ 14142168 (-) True G157874
TU233829 lncRNA upstream 9306 14302872 ~ 14343270 (-) True G157901
TU233833 lncRNA upstream 31150 14324716 ~ 14325647 (-) True G157905
TU233839 lncRNA upstream 32818 14326384 ~ 14391551 (-) False G157906
TU233840 lncRNA upstream 32818 14326384 ~ 14407573 (-) False G157906
TU233841 lncRNA upstream 32818 14326384 ~ 14414000 (-) False G157906
XM_043225081.1 mRNA downstream 14501 14257850 ~ 14272460 (-) True avpr2aa
XM_043225463.1 mRNA downstream 53910 14224588 ~ 14233051 (-) True zbtb48
XM_043225302.1 mRNA downstream 90274 14150523 ~ 14196687 (-) True syt6a
XM_043224788.1 mRNA downstream 182735 14100397 ~ 14104226 (-) True sdf4
XM_043224794.1 mRNA downstream 192525 14085586 ~ 14094436 (-) True ctdsp2
XM_043224624.1 mRNA upstream 135406 14428972 ~ 14524636 (-) False lrp1ab
XM_043224623.1 mRNA upstream 135406 14428972 ~ 14524636 (-) True lrp1ab
XM_043225371.1 mRNA upstream 261248 14554814 ~ 14563800 (-) True senp1
XM_043224161.1 mRNA upstream 270898 14564464 ~ 14569658 (-) True LOC122328465
XM_043224258.1 mRNA upstream 276781 14570347 ~ 14589622 (-) False fitm2
TU233040 other downstream 1004634 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 1069553 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 2362311 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2485329 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2541566 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 33400 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 287528 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1053851 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1405703 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1405703 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile