RNA id: XM_043225025.1


Basic Information

Item Value
RNA id XM_043225025.1
length 1873
RNA type mRNA
GC content 0.49
exon number 10
gene id kansl2
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 14050691 ~ 14056567 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCCAATCAGAGTAAACGTAGGAGGGCGCTAAAATGGATGACGTTCCTCCGCAGCTCATTGTTGTCCATGGCGATGATCACTGGAAGGGGCGGCAGGAAGGTCTCGCTTAAACGTTAACAAAGTGTTACTTTTTAGTGATGAACAGGATTCGGATCCACGTGTTGCCGTCCAGCAGAGGTCGAGTGACTCAAGCTGCTCGTGCTCAAGAACCTCAGACCTGCTCCTACACCCAGAGACCCTGTTCACAGCCTCGTCTTGAGGGCCTAGAGTTCTGCATCAAACATGTACTTGAAGATAAAAATGCTCCTTACAGGCAATGCAGCTACATGTCTAACAAGAATGGCAAGCGCTGCCCCAATGCAGCACCAAAACCAGAGAAAAAAGATGGGGTATCGTTCTGTGCTGAACATGCACGTAGGAATGCTTTGGTTCAGCAAGCTCAGATGCGGAAGGCATCTGCCTCAGGACCTTCTCCTGAAGTCTTGCTGTCTCAGCTCAGCGGCTACAGTCGGCCGGAAACTGGAGCTCACAGTCAAGAGGGCCGTAGTGAAGCTAGTCGTATACTAGACGAGGAGAGTTGGAGTGAAGAGGAGCAGGATCCTGTTGTTTTGGATCAGACATGGAGAGGAGACCCCGACAGTGAAGATGAAAGTCTTGACAGTGACCACGACGATCCTTTAAAGCATGCGGGTGTGTACACAGCAGAGGAAGTGGCACTCATCACACGTGAAAAGCTCATCAGACTTCAGTCCCTCTACATTGACCAATTTAAACGCCTGCAACATTtactaaaagaaaagaaacgaCGCTACCTACACAGCCGCAAAATTGAACACGAGACAATTGGCAGCAACCTGTTAACGGGTCCAGAGGGGCTGTCCACTAAGGAACGAGAGAACCTGAAAAAACTGAAGGCTCTACGACGTTATCGCCGTCGCTATGGTGTGGAGGCTTTGCTGCATCGCCAGCTCAGGCAGAGAAGACAGGCGATTACTGAGGGAGGAACGCCACAGGCGATGCGTTTAGGCCAGAGATGTATTTCTTTTGTGGAAGGGACTCGCTGTTCAAATCCATGTCTGCCAATGACACGACACTGTGTCTCTCACATTTATCAAGACAGTAGCCAAGTGTTATTCAAAATGTGCCCTGGTCTGAAGGACGTTCCATGTGATCGGCCTGTGCACATGGGACAGTCAGAAGAGCCCCGCTGTCCTCTGCACCTGTCCCTGCCTCCACCCATGTACCAGCCTGAGCAGGAGTCTATTGCCCCTGAGCAGCTGGCGTCTGCACCCACAGACATGTACCTCAGCGCCGCAGAGCTCCAGCCAACGGAAAATCTACCTCTGGAATTCAGTGATGATCTTGACGTTGAAGATGAGGGTTTGCAGTGTCCCCCGTCCCCCTTGCTGTTTGACACAGCGCTTGCGTTAGAAGACCAGACAATCAGAGAGATCGCCGAGGCCCCCATGGACATTCTGACAGGGGCAGAGCAGGGCGATCTGGACGGCTCTGCCCAAGATGCTGAGCTCTCCGAGAGAGACGAGGTGTCTGTGGAAGATCAGGTTGAATCTGAAATACTTGAAGCAGTTGGACAAGCAGTTCCCATGCAGAATTCATCAAAAGACTCTGACACGAAAACAACAGATGCCTTATCCTGAGCACCTCGTGACCTGATTTTCTCAGCTGTCGTTCTGTTGATATTTCAAACAGTCCAGATATCTATTTAAAAGCCATATTTCTGGAAGTTTGCTTTGATTGCCGAAACATTTTTAACCTAACATTCTCATTACTTAAAATagcacagtaacacattaaatgTTCTTATATCAACTGCAAGTGTCTTGTGAAATTAAAAGGACAGTTAAATGCGCA

Function

GO:

id name namespace
GO:0000123 histone acetyltransferase complex cellular_component

KEGG:

id description
K18401 KANSL2; KAT8 regulatory NSL complex subunit 2

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233198 lncRNA upstream 10492 13981975 ~ 14040199 (+) True G157481
TU233195 lncRNA upstream 95145 13955112 ~ 13955546 (+) True G157479
TU233192 lncRNA upstream 97219 13944085 ~ 13953472 (+) True G157476
TU233190 lncRNA upstream 106772 13943589 ~ 13943919 (+) True G157475
TU233189 lncRNA upstream 108259 13942021 ~ 13942432 (+) True G157474
TU233221 lncRNA downstream 29027 14085594 ~ 14086952 (+) False G157496
TU233222 lncRNA downstream 29027 14085594 ~ 14087258 (+) True G157496
TU233216 lncRNA downstream 31014 14087581 ~ 14088519 (+) True G157494
TU233215 lncRNA downstream 31385 14087952 ~ 14088519 (+) False G157494
TU233223 lncRNA downstream 37511 14094078 ~ 14094458 (+) False c1qtnf12
XM_043225021.1 mRNA upstream 163 14044783 ~ 14050528 (+) True mlh3
XM_043225022.1 mRNA upstream 163 14044783 ~ 14050528 (+) False mlh3
XM_043225024.1 mRNA upstream 163 14044783 ~ 14050528 (+) False mlh3
XM_043224174.1 mRNA upstream 37812 14008220 ~ 14012879 (+) True szrd1
XM_043225565.1 mRNA upstream 138941 13905088 ~ 13911750 (+) True clcnk
XM_043224783.1 mRNA downstream 1403 14057970 ~ 14085170 (+) False nckap5l
XM_043224787.1 mRNA downstream 1403 14057970 ~ 14085170 (+) False nckap5l
XM_043224786.1 mRNA downstream 1403 14057970 ~ 14085170 (+) False nckap5l
XM_043224785.1 mRNA downstream 12866 14069433 ~ 14085170 (+) True nckap5l
XM_043224790.1 mRNA downstream 38219 14094786 ~ 14126167 (+) True c1qtnf12
unassigned_transcript_2622 other upstream 2532155 11518465 ~ 11518536 (+) True trnae-uuc_33
unassigned_transcript_2620 other upstream 2534820 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2619 other upstream 2536845 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2618 other upstream 2537993 11512625 ~ 11512698 (+) True trnan-guu_35
TU231904 other upstream 2873658 11174421 ~ 11177033 (+) True G156586
XR_006247900.1 other downstream 118 14056685 ~ 14056821 (+) True LOC122329330
XR_006247782.1 other downstream 243134 14299701 ~ 14343274 (+) False si:dkey-151g10.3
TU233368 other downstream 627423 14683990 ~ 14685316 (+) False LOC122328906
TU233419 other downstream 655580 14712147 ~ 14714533 (+) True LOC122328914
TU233447 other downstream 679434 14736001 ~ 14749402 (+) False LOC122328907

Expression Profile