RNA id: XM_043225055.1


Basic Information

Item Value
RNA id XM_043225055.1
length 3386
RNA type mRNA
GC content 0.47
exon number 15
gene id zbtb17
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13887196 ~ 13897098 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AACTGCCAGCCATTCGCTCGGCCATTATCAATCGATCAGAGAGCAGAAGATGGCGGCGCATCGAGGCTGAGCACTGAGATCGATCACCGAAACACTCGATTGGACGGATCAGCTGAAGTCGGGGGAAAGCTAAAAACTCGTCCGTTATATGAGTCAGGATACTATTGCCTAAAGCACTGTAGTCCACTCCATCAGTTATGGACTTTCCTTGGCATAGCGGGAAGGTTCTTGGGCAGCTTAATGAACAACGTCAGTTGGGTCTTCTTTGTGACTGCACGTTTGTCGTGGATGGAGTAGACTTCAAGGCCCACAAGGCTGTGCTGGCAGCATGCAGTACTTACTTCCGCACACTCTTTTTGGACCAGAAAGATGTTGTTCATCTTGATATCAGCAATGCTGCAGgtCTTGAGCAGGTCCTTGAGTTTATGTACACTGCAAAGCTGACTTTAAACCCTCAGAACATAGAGGACGTTCTTGCTGTAGCTACTTTCCTTCAGATGCAGGAAATCGTCAATGCTTGTTCAGCTTTTCAGTCCTTGACTGTCCCTGCATCATCTAAACCTGTGGTAGCGACTGACCCGGTGGAGGAACAGCCGGGAACTGTGAGAAAAGAGGAGGATTTAAGTTCCCAGGAGGAACAGGAGACTCATTCAGTGACTCAGAACGCAGCTTCTGAAGAGAAGGAAGCGCCTGTACAGTCAGAGACAGCAGAAACCCAGAAAGCTGCAAGTGACACGACTGAGAAGCAAAACACAAAGACTTTGAGATCTGTCAGCAAAGCTGGTGGGCCATCTAAAACGAGACAGAAAAAGAGCGCTGTTGTGGATTCCAAGACTGAAACGGAGGAAGAAAGAGCCACAAAAGAGATTCCCCAATATGAAGATGATCCTTCTGATGCTGACTACACTCCTAAAATCTCTCAGAGGGCAGCAGCTAAACGGTCATATGTTAGCACAAGGAGGAGCAAGTCGAAATATGCAGCTGTTCACACATCCACAGAAGtTGACGACTCTGAGGAAAGCATGTCAAAAGCTGACAGCGTGGAGAACATGGTAGAAGAGGAGGATGTAGAGGAAGAAGGAGAAAcagatgaagaggaagaagcAGAAGACCAGATGGAGACACAGGATGATGAAGCATCAGGTTTGGATGGGAAGAAGTCAGCACTTGCGGCCGAGAGAACTGAGTCCAGAGCGTATGGCTCCATCACACACAAGTGTGAGGACTGTGGGAAGAAGTTTACACACACAGGAAACTTTAAACGTCACATGCGCATTCACACTGGTGAGAAGCCATTTAGTTGCAGAGACTGTAGTAAAGCCTTCTCAGACCCAGCTGCCTGCAAAGCGCATGAGAAAACACATAGTCCTCTGAAACCATATTGCTGTTCGACGTGCGGAAAGAGTTACCGGCAAATCAGTCTGCTAAACCTGCACAGGAAGCGACACACAGATGAGGCGCGATACAGCTGTGAGGACTGTGGGAAGCTCTTCACCACTTCTGGAAACCTGAAGCGGCATCAGTTGGTGCACAGCGGAGAAAAACCCTACCACTGTGACTACTGCGAACGGGCCTTTTCTGACCCCACCGCCAAGATGCGACATCTAGAGACCCACGACACAGACAAAGGTCACAAATGTCAGCACTGTGACAAGAAATTCAACCAGttggGAAACCTGAAAGCACATCTGAAGATCCACATTACAGATGGGCCACTTAAGTGTAAGGAGTGTGGGAAACAGTTCACCACCTCAGGCAACCTGAAGAGACACCTGCGTGTGCACAGCGGTGAGAAGCCTTTCATCTGTATGCACTGCCAGAGAGCGTTTGCTGACCCCGGGGCCTTGCAGAGACACGTGCGCATCCACACAGGAGAAAAGCCCTGTTTGTGTCTGATTTGTGGAAAAGGCTTCACGCAAGCCAGTTCACTCATAGCTCATGTTCGCCAACACACTGGGGAGAAACCATATGTGTGTGACCGCTGCGGAAAAAGGTTTGTCCAGTCCAGCCAGCTGGCCAATCACATTCGTCATCATGACAATATCCGACCACACAAGTGCCACACTTGCAACAAAGCGTTTGTCAATGTGGGAGATCTCTCAAAACACATCATCATTCACACAGGAGAGAAACCTTTCCTGTGCGATAAATGTGGCCGAGGATTCAACCGTGTGGACAATCTGCGCTCCCATGTGAAGACGGTGCACCAGGGGAAGGCGGGCATGAAGAGACTGGTGGTGGCCGAGGAggacgagggagaggagaaaCTGCTGGCAGACTCCTCACCAGACCCAGAGCTCAACAATGAGGTCAACATCGTCACGGTCACTACAGATGACATTGTGACTTTAGCCACAGAGGCTCTTGCTGCCAGTGCTGTAGCACAGCTCACAGtTGTACCAGTGGCAACCTCTGTATCTGCAGATGAAACTGAAGCACTGAAAGCAGAGATCACCAAAGCAGTGGAGAAAGTACAAGAAGCAGATCCCAACACCCAGATCTTGTATGCATGTGACTCATGCGGTGACAAGTTCCTGGACGCCAGCTCCCTTGCCCAGCATGTGCGCATTCACACTGCCCAGGCCCTGGTCATGTTTCAGGCAGATTCTGACTTTTATCAGCAGTATGCAGGTGAAGGGACATGGCAAACCACCGAGCAGGTCATCCAGGGAGGCGAGCTCTTGTTCCGGACACGGGAGGAGGACAGTGAGGAAGGAGAAGGAACTCTAGCCCAGACAGAATCTCAAAGTGAGGGGGCAGAGGAGGAGACAAGTACGCAGGCAGAAACAGAGGAAGGGTCTAGAAAAGTCAAGTCTGAAAGCCAAGGACAGTGAAGAGTTTCTGACCTGAATCGATCCAAAGGATGGAGTTCAGACTGTCACAAAGTGTGCTATTTCttaaatgctataataaaacacactctACTAGATAGATGTCATATCTCAAACCACAGCACAATATGTACACAGCATATTAAAACTACGTTGTATAGagttcagtttaaataaatataacaagaaacaaatgtgtaattaaatatgaaaaaaacccACCTAATTTGTATGCTGTATGTCAGACTTTTTAATGCTAGATTCTCCATGTATATGTCCTATTCTATATCATGTATTCTCTGTTACTGAAGCCAATTAAACATGCGACTGTCCTACAGGTTTCAGTTGTCCACAAATCAAATACAGTACTGAACTGTTATTTATTGATTCGTTAGTGTATTCTTTTGTTTGTGGAGTTCAATCATTTTCTATCCGAGCTTAATACTGCTTGCCatgaacataaaaatgattaaagagCTGATTTTATCTGTATGCTTATCACTCTCATGACGTGTAGAAACTGAAGAAACTCacaataaacacttttaaattgtC

Function

GO: NA

KEGG:

id description
K10500 ZBTB17, MIZ1; zinc finger and BTB domain-containing protein 17

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233703 lncRNA downstream 61607 13823993 ~ 13825589 (-) True G157826
TU233679 lncRNA downstream 113888 13772775 ~ 13773308 (-) True G157813
TU233665 lncRNA downstream 140025 13742257 ~ 13747171 (-) True G157799
TU233620 lncRNA downstream 451335 13433755 ~ 13435861 (-) True G157765
TU233023 lncRNA downstream 765170 13121813 ~ 13122026 (-) True G157365
TU233774 lncRNA upstream 160739 14057837 ~ 14075937 (-) True G157863
TU233788 lncRNA upstream 244841 14141939 ~ 14142168 (-) True G157874
TU233789 lncRNA upstream 246564 14143662 ~ 14143930 (-) True G157875
TU233765 lncRNA upstream 325711 14222809 ~ 14225394 (-) False zbtb48
TU233794 lncRNA upstream 339254 14236352 ~ 14237014 (-) True G157880
XM_043225468.1 mRNA downstream 1116 13882388 ~ 13886080 (-) True ddost
XM_043223981.1 mRNA downstream 5478 13869388 ~ 13881718 (-) False plekhm2
XM_043223979.1 mRNA downstream 5478 13869388 ~ 13881718 (-) True plekhm2
XM_043223982.1 mRNA downstream 7284 13869388 ~ 13879912 (-) False plekhm2
XM_043223984.1 mRNA downstream 18627 13852466 ~ 13868569 (-) True ano11
XM_043225057.1 mRNA upstream 708 13897806 ~ 13901112 (-) True hspb7
XM_043225568.1 mRNA upstream 15457 13912555 ~ 13923481 (-) False fam131c
XM_043225566.1 mRNA upstream 15457 13912555 ~ 13923450 (-) True fam131c
XM_043225567.1 mRNA upstream 15457 13912555 ~ 13923445 (-) False fam131c
XM_043225093.1 mRNA upstream 35890 13932988 ~ 13955555 (-) True epha2b
TU233040 other downstream 604869 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 669788 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 1962546 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2085564 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2141801 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 429868 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 683996 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1450319 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1802171 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1802171 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile