RNA id: XM_043225057.1


Basic Information

Item Value
RNA id XM_043225057.1
length 1527
RNA type mRNA
GC content 0.39
exon number 3
gene id hspb7
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 13897806 ~ 13901112 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CAACTCGCAGGCTAGACCCACCATATAAAAGACAGTCAGACAGACAAAAGCCATACCAGAGAGACACAGCTGATATAAAGAGTGAGAAAGGTTCTGAGGCTTGAGAGAGGATTCACGCAGTGTTTTGAATAAGGACAGCGCAAAACTACTTCATTTACACACTTAGTGCTCACTGTATCTCTTCAAAGCTCTGACTGGATATCGATTTGAAACCGTCTAAACACTAATGAGTGCGACCAACTCCTCTGCCTATCGATCGGAGCGCAGTTTCCACCAGACgtcctcctcatcttcatcttcaacCTCAACAAACCCATACATGGAGAAGAGCCGGGGACTCTTTGCAGAGGACTTTGGATCTTTCATGTGTCCAAAAGATGCTTTGGGATTTCCAAaCAGAACAGGGACAGTTGGAAACATCAAGACTCTGGGAGACACATACCAGTTCACAGTGGATGTCCGAGACTTCTCTCCTGAGGATGTGATAGTCACCACCTCAAACAATCAGATTGAAGTACATGCTGAAAAGCTTGCTACTGACGGAACAGTGATGAACACGTTTACTCATAAATGCCAGCTACCAGACGATGTAGACCCCACCTCGGTGAAGTCGAGTTTAGGGGCTGATGGGACACTCACTATTAAAGCACAGAGAAACACCGCAAAACTGGAGCACGCACAGACTTTCCGCACAGAGATTAAAATTTAGATCTTTCCTCTCCCGCTCTATCTGTTTTCCTGTGATAAATGACCTTGATAATAGTTACTTAGTCCTGCTTTGTCATTCCTCCATGACCTTCTCTCATTACTTCTCGTTAGACTTGGGTGGAATTTAATCCTGTCACAtgtattcaaaacatttaagacAAATGCACTGCTAACGTCAATTCCCTGCTAAATACGTATCACCttacagtggggtccaaaatTGTGGAGACCCCAAAGAACATCTGTGATTCTAAATCCAATTTTAATCTGTAAAGAAACAGAGCATTTTAGGATTTTGagagtataaaataaaatgcatgtctttaaataaataagaagtgTCTCAAGTGTGCACTATTCTGTCACGCAATGTAATCTAATTTGTTAGGTTGATCACATGGTTGATCTCTTTCTGCAGATGCTCAGATGTTCTTGCTTCCATTAAAGCTCAAGATTATCTTTGAGTCATTTAAATCATGGTGGTAAACATGATCATCAGGCTTTATACAGATGTGTGAGGTTCATGTAGTTTGAGTGTTGTTGTCATGAAATCAACAAGAGGACAAACCAAATACCAAAATGTTAACTTTTCcctaataatataatttgaaatgcgtaaaaaaacattttagtagtAATTGTCCAAGACTTTTGGAGCTTGTTGTATGACAAACGACTAAAAGAGAAACCCATTAATTGAACTGATTCTTATTCTTATCAAAAGGTATATTTTCTAACTGTAAACCTGTGTCGTGTTGGGTGATCTAAAAATGATTCTAGAAGATAATAAAACCAGAACACCACTGATTAGTATTTTAA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG:

id description
K09546 HSPB7; heat shock protein beta-7

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU233703 lncRNA downstream 72217 13823993 ~ 13825589 (-) True G157826
TU233679 lncRNA downstream 124498 13772775 ~ 13773308 (-) True G157813
TU233665 lncRNA downstream 150635 13742257 ~ 13747171 (-) True G157799
TU233620 lncRNA downstream 461945 13433755 ~ 13435861 (-) True G157765
TU233023 lncRNA downstream 775780 13121813 ~ 13122026 (-) True G157365
TU233774 lncRNA upstream 156725 14057837 ~ 14075937 (-) True G157863
TU233788 lncRNA upstream 240827 14141939 ~ 14142168 (-) True G157874
TU233789 lncRNA upstream 242550 14143662 ~ 14143930 (-) True G157875
TU233765 lncRNA upstream 321697 14222809 ~ 14225394 (-) False zbtb48
TU233794 lncRNA upstream 335240 14236352 ~ 14237014 (-) True G157880
XM_043225055.1 mRNA downstream 708 13887196 ~ 13897098 (-) True zbtb17
XM_043225056.1 mRNA downstream 2165 13887196 ~ 13895641 (-) False zbtb17
XM_043225468.1 mRNA downstream 11726 13882388 ~ 13886080 (-) True ddost
XM_043223981.1 mRNA downstream 16088 13869388 ~ 13881718 (-) False plekhm2
XM_043223979.1 mRNA downstream 16088 13869388 ~ 13881718 (-) True plekhm2
XM_043225568.1 mRNA upstream 11443 13912555 ~ 13923481 (-) False fam131c
XM_043225566.1 mRNA upstream 11443 13912555 ~ 13923450 (-) True fam131c
XM_043225567.1 mRNA upstream 11443 13912555 ~ 13923445 (-) False fam131c
XM_043225093.1 mRNA upstream 31876 13932988 ~ 13955555 (-) True epha2b
XM_043223975.1 mRNA upstream 67406 13968518 ~ 13999572 (-) True spen
TU233040 other downstream 615479 13280256 ~ 13282327 (-) True G157373
TU233029 other downstream 680398 13141078 ~ 13217408 (-) True G157367
TU232479 other downstream 1973156 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 2096174 11799922 ~ 11801632 (-) False si:dkey-93l1.9
XR_006247899.1 other downstream 2152411 11745262 ~ 11745395 (-) True LOC122329329
TU233846 other upstream 425854 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 679982 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 1446305 15347417 ~ 15474377 (-) False magi3a
TU234273 other upstream 1798157 15699269 ~ 15717250 (-) False LOC122329227
TU234274 other upstream 1798157 15699269 ~ 15717250 (-) False LOC122329227

Expression Profile