Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043225269.1 |
| length | 1107 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 2 |
| gene id | LOC122329065 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 8554507 ~ 8557031 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042440 | pigment metabolic process | biological_process |
| GO:0042168 | heme metabolic process | biological_process |
| GO:0046148 | pigment biosynthetic process | biological_process |
| GO:0033013 | tetrapyrrole metabolic process | biological_process |
| GO:0033014 | tetrapyrrole biosynthetic process | biological_process |
| GO:0006778 | porphyrin-containing compound metabolic process | biological_process |
| GO:0006779 | porphyrin-containing compound biosynthetic process | biological_process |
| GO:0006783 | heme biosynthetic process | biological_process |
| id | description |
|---|---|
| ko00860 | Porphyrin and chlorophyll metabolism |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU230759 | lncRNA | downstream | 21580 | 8526402 ~ 8532927 (-) | True | G155803 |
| TU230697 | lncRNA | downstream | 171900 | 8307279 ~ 8382607 (-) | True | G155759 |
| TU230649 | lncRNA | downstream | 376989 | 8176699 ~ 8177518 (-) | True | G155737 |
| TU230585 | lncRNA | downstream | 581182 | 7973103 ~ 7973325 (-) | True | G155698 |
| TU230540 | lncRNA | downstream | 702256 | 7819746 ~ 7852251 (-) | True | G155669 |
| TU230786 | lncRNA | upstream | 67895 | 8624926 ~ 8625642 (-) | True | G155825 |
| TU230942 | lncRNA | upstream | 71668 | 8628699 ~ 8629103 (-) | True | G155933 |
| XR_006247890.1 | lncRNA | upstream | 513353 | 9070384 ~ 9072944 (-) | False | LOC122329247 |
| XR_006247891.1 | lncRNA | upstream | 513353 | 9070384 ~ 9072938 (-) | True | LOC122329247 |
| TU230977 | lncRNA | upstream | 522502 | 9079533 ~ 9097263 (-) | False | ctnnbip1 |
| XM_043225560.1 | mRNA | downstream | 569033 | 7978891 ~ 7985474 (-) | True | gata5 |
| XM_043225407.1 | mRNA | downstream | 599512 | 7932443 ~ 7954995 (-) | True | LOC122329207 |
| XM_043224019.1 | mRNA | downstream | 622403 | 7922253 ~ 7932104 (-) | False | tm9sf4 |
| XM_043224018.1 | mRNA | downstream | 622403 | 7922253 ~ 7932104 (-) | True | tm9sf4 |
| XM_043225052.1 | mRNA | downstream | 688120 | 7862203 ~ 7866387 (-) | True | LOC122328942 |
| XM_043224373.1 | mRNA | upstream | 142794 | 8699825 ~ 8777258 (-) | False | casz1 |
| XM_043224374.1 | mRNA | upstream | 142794 | 8699825 ~ 8777258 (-) | True | casz1 |
| XM_043224375.1 | mRNA | upstream | 142794 | 8699825 ~ 8748315 (-) | False | casz1 |
| XM_043224372.1 | mRNA | upstream | 142794 | 8699825 ~ 8748315 (-) | False | casz1 |
| XM_043224607.1 | mRNA | upstream | 356032 | 8913063 ~ 8919763 (-) | False | c23h1orf127 |
| TU230763 | other | downstream | 2530 | 8545394 ~ 8551977 (-) | True | G155807 |
| unassigned_transcript_2616 | other | downstream | 348991 | 8205423 ~ 8205516 (-) | True | trnai-uau_41 |
| unassigned_transcript_2615 | other | downstream | 349291 | 8205123 ~ 8205216 (-) | True | trnai-uau_40 |
| unassigned_transcript_2614 | other | downstream | 349818 | 8204596 ~ 8204689 (-) | True | trnai-uau_39 |
| unassigned_transcript_2613 | other | downstream | 350118 | 8204296 ~ 8204389 (-) | True | trnai-uau_38 |
| TU230789 | other | upstream | 68727 | 8625758 ~ 8628391 (-) | True | G155827 |
| XR_006247823.1 | other | upstream | 356031 | 8913062 ~ 8919725 (-) | False | c23h1orf127 |
| XR_006247824.1 | other | upstream | 356032 | 8913063 ~ 8919725 (-) | False | c23h1orf127 |
| TU230970 | other | upstream | 364533 | 8921564 ~ 8926610 (-) | True | sst6 |
| XR_006247818.1 | other | upstream | 639196 | 9196227 ~ 9209964 (-) | False | ccdc187 |
