RNA id: XM_043225309.1


Basic Information

Item Value
RNA id XM_043225309.1
length 3253
RNA type mRNA
GC content 0.44
exon number 7
gene id nkain4
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4928029 ~ 4977122 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

tctcccagtctctctctctctctcacacacacacacacacacacactctctctctcacacacacacacactctctctctctctctcacacacacacacacacacacacaccctcgcGCCACAGCAGTGCTCGGCTCACACTTCCACGCGTGCTTCACTCAGCGCCGCTGGAAACAATGGGAACGGAGCCGCTTTGTGTCGGACAGAGACTGACGCGcttctctgtgtttgtttaggaCTTTCTGCTGATAGTCTCATATATTCAGGATCTCATTATCGCGTTTAACACAATGGGCTGCTGCAGCGGACGGTGCACCCTTATATTCCTGTGCACGTTTCAGTTGatggtGGCATTAGAGAGGCAGGTGTTTGATTTCTTGGGCTACCAGTGGGCTCCCATCCTTGCAAACTTCTTCCACATCTTGGTTGTCATTCTGGGTTTGTTTGGCACCATTCAGTATAGACCTCGCTACATTGTGGTGTATACTGTGTGGACGGCGCTGTGGGTGGCCTGGAATGTCTTCATCATCTGCTTCTACCTGGAGGTTGGAGGTCTATCAAAGGACAGCGACCTCTTGACCTTTAACATCTCGGCACACCACTCCTGGTGGAGCGAGCACGGCCCGGGCTGTGTCCGAAGAGAGATCCCGGCCAGCGAAAACCGCAGTGCAGACTCACAGTCCTATATATCCATCATGGGCTGCCTGCTGGAGTACCAGTACATTGAAGTCCTGCACAGCGGCTTCCAAATCCTTATCTCTCTGCTGGGTTTCATCTACGCCTGCTATGTCATCAGTGTCATCACAGAGGAGGAGGACAGCTTTGATTTTATTGGTGGATTTGACCCATTCCCACTCTACCATGTCAATGAGAAACCATCTCATCTTCTGTTAAAGCCCGTGCATCAGTCTTCGTAAATGAAAGTGCGTCGTGAAGAAGAGGCTCTCGGCCCGTTCCTCCTCTCTGCTTCTCAGCTCCTGCTTCTCCTCCGTTTAAAAACGCTTCCTAATCGTCCTAAATCAGCCCTTTCTGGAGACCTGGAGAACTGGCTCTTGATTCCCAGCTCCATCTGACGCTCCGGCCGCAGTGTTTAGACGCTCTTACAAGTGGCTGTAAAACATATCTAAACAGAAAGGCCCGGTGTTTTGTTGGTGCGGTGTGTGTGGTCCACGCGTCCCAGTTATTCAAGGAGAAGGTTGAGATGTTGAGGTTCACAGAGTtccagctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgctgtttACCTTCACACGGGAACTGGCCCGGTGAAAGAGAGCAGGGAGCAGAGACGAGGAAAACGGGTGCGGCCCCGAAAAATAGACAAAGAAAGCTGACCTCCGGTGGCAGTCAAAAAATAGAAGCAAAGgaagtgtaaaatataaatacaagaaACAATTAGAGCTGTTTTATGTCGTAGCGTTATGTACAATTCTCATAATTCACTGTAAAATTCAGTTTGACtcttttttgttcgttttaagACTTGATTTATATGCAGTGAACCCCAAATCGCTGTACCGAGGCACATTTAAATCACGCTAAACAATGCGTGATAGTCGTTAAATCAGACGGGTTAGTTTTGGGAgtcatgcatgcaaggtcaaaaaacactttttttttaagttttgcattttaattgtgaCTCGGGAGTTTTGGGGTCACTGTGCATGCAGTcggtatttttaatgttaataatcaTCATTTATCGCACAATGTGTTTGTATCAGCCTTTAGAACAGAAACTAGTTTGGGCTCCGGCCGGTAGTCAGTCGATACCGACAGTACAGTTATTACATAACCTCATGCTGTTTTCGTAATCTATAATGTAACAGGACTGGCCGGTGTTACGAGACAGAAAAGGGTTCTGAATGGTGCTTGTAATCAAAAGTTAGTTTGTGAACAAATCGTCAGCATGTCGTTGTATGAGTATGAGTAGCGGTTGAGTGGCTGTCCATGTCTTTCACTGTAGATGCAGAGCTACTGTAACTGTTTACTGGAAACATAAACCTCAAAGCACAAATGACTGGCCGTAAGTGTGTATGACATGTTTTGAAGAGACTGTGCATTTCTTTCCTAATCGAGACGTGGAGGTCAAAGGTCGGTATGTGTTTTCTCATTTTCGTAGTCGCATAGTTGCTTGTTTTCCCGGGTGTTTCATATCACGAGACGTGCGTACTGTATTGGCAGCATTTTCGGGTGCTTGTGGCCTGCTGGTAAAGAAACGGGacttatttagtcattttaaaggaacagttcatccTTGCCGTCGCTCacgtaaaatgcaaaaaaggaGAGCTTTGGACAAATGCTTGTCTCGCTCTTTTTCCaatcaaacagaaaaaagtGGTCACTCTGAACATTAAAGGCTCTTTATTGGCATCTGTGGGTCCGTGAAGAGACTTTAGCATCCAGGGAACCTTTCTTatacacaaaatgtgtttttttaaaattgttctttACTAAGAAAAACATAGTCCTTTAAAGAATTTGGGCAATCggaaaaaccaaaaatgcattCTTCTATGGTAAGAAGTGTTTTTAAGAGTGCATGTTCAAAGCTCGAAGTCGTGGCATAGCTTTGTGCTTTTCTTGTTTGGAAAAGAGTAGCTTGAACATTCtacaaaacatcttttgtgtacCTCGGAAGAAAGTAAATCAGCAGTTTTGCATCATTAgaagggtgagtaaatgctaaaatatatatatttttaggtgaactgctcctttaaatGTTTCAGCATAGTTAGGGGAAGTTTTAGCAGTTAGCATTTAACTAAATGGCAGAAACCAAGGCTTTTCGCTTAATGACATTAGCTTACAGTTATCTCCTTCAGTGTTGGAGTGAGATCCTCCTATTGGTCCTCGATCTCTCCTGCCCTCTAGTGTTCAATGTCTTTCTGTACACTGGACCGGGAAAACTGCATTTTGTACCACTCTGAAAATACTCATGTACATTTGTAATTGTAGAGTTTAGGATATTCAACATAGGCCAGCAACAGTAGCGTTATAAGGAGAAAACGAATGATATAGATTTATATCACACCTCTCCCCTTGTCTGTAcgtctctgtctctttttacaggtgtttttttgtaaacactttttctatctgttttctgtgtttgagCTCTTCTCCGTGGTTCTTCATTGACTGCCTGTCCATCAACACATGTTTGCTGACCAGAGTGTAAATAgatgtttgttaataaaagtatgCTTTTCATCTACAGA

Function

GO: NA

KEGG:

id description
K22735 NKAIN; sodium/potassium-transporting ATPase subunit beta-1-interacting protein

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU229707 lncRNA downstream 14042 4908918 ~ 4913987 (-) True G155112
TU229682 lncRNA downstream 196889 4727854 ~ 4731140 (-) True G155096
TU229678 lncRNA downstream 214947 4712689 ~ 4713082 (-) True G155093
TU229677 lncRNA downstream 217692 4707665 ~ 4710337 (-) True G155092
TU229643 lncRNA downstream 247750 4679983 ~ 4680279 (-) True G155085
TU229766 lncRNA upstream 108020 5085142 ~ 5087946 (-) False G155153
TU229765 lncRNA upstream 110226 5087348 ~ 5089097 (-) True G155153
TU229769 lncRNA upstream 119410 5096532 ~ 5097130 (-) True G155156
TU229770 lncRNA upstream 134722 5111844 ~ 5112964 (-) True G155157
XR_006247896.1 lncRNA upstream 453424 5430546 ~ 5431524 (-) True LOC122329300
XM_043224426.1 mRNA downstream 7147 4914490 ~ 4920882 (-) False ddx23
XM_043224424.1 mRNA downstream 7147 4914490 ~ 4920882 (-) False ddx23
XM_043224425.1 mRNA downstream 7521 4914490 ~ 4920508 (-) True ddx23
XM_043224152.1 mRNA downstream 51001 4835981 ~ 4877028 (-) False adcy6a
XM_043224151.1 mRNA downstream 51001 4835981 ~ 4877028 (-) True adcy6a
XM_043224039.1 mRNA upstream 99231 5076353 ~ 5082995 (-) True gss
XM_043224046.1 mRNA upstream 116711 5093833 ~ 5110924 (-) False sla2b
XM_043224045.1 mRNA upstream 116711 5093833 ~ 5110447 (-) True sla2b
XM_043224040.1 mRNA upstream 137505 5114627 ~ 5153535 (-) True ndrg3b
XM_043224043.1 mRNA upstream 137505 5114627 ~ 5153534 (-) False ndrg3b
TU229703 other downstream 93509 4831818 ~ 4834520 (-) False LOC122329181
XR_006247892.1 other downstream 733031 4173914 ~ 4194998 (-) True LOC122329268
XR_006247893.1 other downstream 733033 4173914 ~ 4194996 (-) False LOC122329268
XR_006247897.1 other downstream 1022137 3894966 ~ 3905892 (-) False lad1
XR_006247838.1 other downstream 1482065 3436779 ~ 3445964 (-) False LOC122328836
TU229887 other upstream 477295 5454417 ~ 5455047 (-) True G155227
TU229892 other upstream 500792 5477914 ~ 5479819 (-) False LOC122329286
TU230261 other upstream 1753729 6730851 ~ 6731886 (-) True G155489
TU230276 other upstream 1789486 6766608 ~ 6822978 (-) False rps21
TU230273 other upstream 1796456 6773578 ~ 6822978 (-) False rps21

Expression Profile