Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043225391.1 |
| length | 1309 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 6 |
| gene id | csrp1a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056721.1 |
| NCBI id | CM032090.1 |
| chromosome length | 19062720 |
| location | 3922484 ~ 3927906 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0042074 | cell migration involved in gastrulation | biological_process |
| GO:0007254 | JNK cascade | biological_process |
| GO:0003007 | heart morphogenesis | biological_process |
| GO:0060027 | convergent extension involved in gastrulation | biological_process |
| GO:0016055 | Wnt signaling pathway | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0008270 | zinc ion binding | molecular_function |
| id | description |
|---|---|
| K09377 | CSRP; cysteine and glycine-rich protein |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU229116 | lncRNA | downstream | 54643 | 3867282 ~ 3867841 (-) | True | G154724 |
| TU229114 | lncRNA | downstream | 63814 | 3855066 ~ 3858670 (-) | True | G154723 |
| TU229108 | lncRNA | downstream | 84351 | 3837662 ~ 3838133 (-) | True | G154720 |
| TU229092 | lncRNA | downstream | 95294 | 3826827 ~ 3827190 (-) | True | G154708 |
| TU229083 | lncRNA | downstream | 115583 | 3806543 ~ 3806901 (-) | True | G154703 |
| TU229192 | lncRNA | upstream | 9445 | 3937351 ~ 3937638 (-) | True | G154763 |
| TU229193 | lncRNA | upstream | 10667 | 3938573 ~ 3939050 (-) | True | G154764 |
| TU229216 | lncRNA | upstream | 122384 | 4050290 ~ 4050580 (-) | True | G154783 |
| TU229223 | lncRNA | upstream | 135617 | 4063523 ~ 4064880 (-) | True | G154789 |
| TU229221 | lncRNA | upstream | 136059 | 4063965 ~ 4065529 (-) | True | G154787 |
| XM_043225419.1 | mRNA | downstream | 2662 | 3917778 ~ 3919822 (-) | True | phlda3 |
| XM_043225418.1 | mRNA | downstream | 2667 | 3917778 ~ 3919817 (-) | False | phlda3 |
| XM_043225417.1 | mRNA | downstream | 8993 | 3907262 ~ 3913491 (-) | True | tnni1a |
| XM_043225533.1 | mRNA | downstream | 16592 | 3894966 ~ 3905892 (-) | False | lad1 |
| XM_043225532.1 | mRNA | downstream | 16592 | 3894966 ~ 3905892 (-) | True | lad1 |
| XM_043225478.1 | mRNA | upstream | 246008 | 4173914 ~ 4194996 (-) | False | LOC122329268 |
| XM_043225476.1 | mRNA | upstream | 246008 | 4173914 ~ 4194996 (-) | False | LOC122329268 |
| XM_043225475.1 | mRNA | upstream | 246014 | 4173920 ~ 4194995 (-) | False | LOC122329268 |
| XM_043225479.1 | mRNA | upstream | 247840 | 4175746 ~ 4194996 (-) | False | LOC122329268 |
| XM_043225477.1 | mRNA | upstream | 247840 | 4175746 ~ 4194996 (-) | False | LOC122329268 |
| XR_006247897.1 | other | downstream | 16592 | 3894966 ~ 3905892 (-) | False | lad1 |
| XR_006247838.1 | other | downstream | 476520 | 3436779 ~ 3445964 (-) | False | LOC122328836 |
| TU228725 | other | downstream | 970856 | 2925529 ~ 2951628 (-) | True | G154445 |
| XR_006247892.1 | other | upstream | 246008 | 4173914 ~ 4194998 (-) | True | LOC122329268 |
| XR_006247893.1 | other | upstream | 246008 | 4173914 ~ 4194996 (-) | False | LOC122329268 |
| TU229703 | other | upstream | 903912 | 4831818 ~ 4834520 (-) | False | LOC122329181 |
| TU229887 | other | upstream | 1526511 | 5454417 ~ 5455047 (-) | True | G155227 |
| TU229892 | other | upstream | 1550008 | 5477914 ~ 5479819 (-) | False | LOC122329286 |
