RNA id: XM_043225497.1


Basic Information

Item Value
RNA id XM_043225497.1
length 3895
RNA type mRNA
GC content 0.42
exon number 9
gene id znf362b
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 12204333 ~ 12212104 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCCGACCAATTACTTAAGCCTAAAAGCAGCGGTCCCGTTTCTGTGGGACACAAAAAGCCTGGGATGTGCCAGCTAAAATGAGAGATTTTGGTGTACAGCACCCAGAAGTGAACAGGCTGACCCGGAAGCTGTGTGGTCTGGAGGCGCATAGAGAACATCCAGCCTCTTCTCTGCTTTATTAAAGCCTCTCCTGCGAGGAAAAAAACACTCTGACATCGATATAAAAGaaAGATGGCAGAGCCTCGATTCAATAATCCGTATTTCTGGCCACCTCCTCCCTCAATGCCTGGTCAACTGGATAACCTGGTTCTTATCGACAAGATCAAAGAGCAACTGATGGCAGAAAAAATCAGACCTCCGCATTTGCCGCCCACCACTGTTCCCTCTCAGCAGACTCTGCTGGTGGCCTCTCCACCTTCAGATGGTGGGCAGCATGTGATGTCTATCCCCAAGCTGCAGCAGGTGCCGGGTCTTCAGGCTCACAACTCCTCTCAGCCTGACATCGCCCTGCACGCCCGCCCAGCATCCAGCACCATCGCAGAGCTGAGTATAGATGACAAGTCTTCGGTGAAAGCAAAGGGGCTGTGGGAAGATTGGCATATGCGACAAGCAGTGGACCAAGCCTCTAGAGTGAACCATCGCTCAGGTCTCATGCTGTCATCCCGCACAGAAAGCCACATCACCTCTGAGGCTATAACTCCCACAACCCCGACGTCCAGCAGCCAGAACCGCTTGGGCGGCGCACCTTCCTTAAACACCATTTCCGGCTTAGCCAGCGGTCCTGGCATGGAGCACGTGAAAAGTGGAGGTCTGGTGGGGATGCTGGGACCACAGCCCAAAGCTCCAAGGGGCCGCAAGAAGATTAAAGCAGAGAACAACACGGGCCCGTTGCTGGTGGTACCCTACCCGCTTCTGGCCTCGGGCCCCGACCAGGCGGTAACCATCGCCAAAGAGGGAAAAACATACAGGTGTAAAGTGTGTCCCCTCACTTTCTTAAACAAGTCGGAGATGCAGATCCATTCCAAGTCCCACACGGAGGCCAAACCCCACAAGTGCCCTCACTGTTCAAAGTCATTCGCCAACGCCTCATACCTAGCACAGCACTTACGTATTCACTTAGGCATTAAACCCTACCACTGCTCCTATTGCGAGAACTCTTTTCGTCAGTTATCACACCTCCAGCAGCACACCAGGATTCACACTGGTGACAGACCATATAAATGTGCCCAGCCAGGATGTGAAAAGGCATTCACACAACTCTCAAACCTACAGTCTCACCAGAGACAACATAACAAAGACAAGCCATACAAGTGTCCGAACTGCTACCGCGCATACACAGACTCAGCCTCCTTACAGATCCATCTCTCCGCACACGCCATTAAGAACGCTAAATCGTACTGTTGCAGCATGTGTGGTCGCGCGTACACCTCAgagaCCTACCTTATGAAGCACATGTCCAAACACACCGTGGTGGAGCATCTGGTCAGCCACCATTCACCACAGAGGACAGAATCTCCCAGCATCCCCATACGCATTTCACTTATTTGAGCTTCCTCCCTCGTGTTTCTCTTCCATTACAAGGTATTTTGTTCGCCGCGATGGTCTTccgttaaaaaaacaaaaacacgatAAGTGTTGAGAGACCTCGGAGGACATTTGAGTGATTTATCTTCGCCCCTTTAGCTCTTAGTCATATAAAGCCTACTACAGGTCACAGACTCGACAACTGCTGTCAACTCCAGACGCCAGTCTAAAGGAATTGAATCGATTTTTCCAAAACAAGAATGAGTTGTGATCATTTAACATTTCGTTTCAAAGGTGTGTAAAGGGAGACTTCCAAAGATACTCTTTAAGCACTTTTCAGCCTCGTGGTTTTGGCTCAAAGTTGAATGAATCTTTTACAGTATGGGAGCGGCTTCTCGCTTTGGGCAGCTATGAGAGTTTCGATTTAGTTTTGACAGGATATTGcgttttattttactgtggATGTGACACTTCTTCCGCTTTAAGCATCTATTATTCTTTAAGGTCACGGTCGAGGAGTGAAAGGTTACTTTTTGGGTTCTGTGTGCCGTGACACAGTTGCGGTAAGGTCAGTTCTGTGGATTTTATAAGCACCGTCATTACTTGagtattttgtacttttaaagGTGAAGGAATTCCAAGAAATCCCCCGCTAACATAACAGAGTGTCAGTAAGATACAACACTCTCTAAACAAATGAGTTGCGTTAGTTGCATCATagatgttttactttttgcGACAAGgcctttttttgtgtgcaatgcGAATTTAATCCCTTCCAATCACAGTATTTCAAGGAAAAAGTGccctttttgtcattttttttaattaaatggcaTAATTGCAGAATGGCAATGTCCATCAAATGGATTTTTGTCACGATGTAACTGAAGAAGTGTCACACAGGTTCAGCTTTTTCTAACTGAACCGCACAATTAGGATGTAGCGTGACCTCTGAACCCCGTTAAGTGTTAACGCCCTCTATTCTTCTCCACATAACACCCTGAGACATTGAGTTACACCGATGGAAAGTGTTCatggtttttttgggggggtttttttgATTATGATGTAATCAAAAGCAGTGGcctattttgaaatgtttatattcatcAGATTAGAATCTCGTATACCAAAATATCAGTAATCACGTTTTAAGAAAatcaagtcaaaaaaaaaaaaagctcattttgaaTGTAGTCGTGCGTTTCTGTTATATAAGTTCATCCAAAAGTAATAACTCCTCAAATCTGGTAtgtttaacagatttttttaatacatatatatatatatatatatatatatattttgctcaAACCAGCATACAagctgaaaaaacattttaacagtagTGGATAGCATTATTCTTACTGAGTTAAAGCACGTGTGGTCTATTGAAACGTTTGAGCCAAATTTGATCATCATACGTGATCATACTTGCCGTATGTGATTTCAACAGGCCACTGCAGCTCTAcaacattcatttctttttgtggTCATTTATACCAGTCATTTGTTAAGctcactattattatttttttttcattcatgtatatttagaaaactaAAAAAGGACCAAGCTTTCGCTCTCAAATTTCcctaaaatacatatataattgtgattatatatacagtttagCTGATTTGTCATGAAGTAATGGTTTACTGGGTcacacagaatttttttttttgtctgtaataTTTGGGAATATGACCAATCAGCGTCACAGTTTTAGATAACAGCAATTTGATGAGGATCTACTTCTTGGTGCTTTCTACAAAACCTCAGCTCATTGCCGGGAATAGATTATTACATTACAGTATAATCTTGGATTGTTCATCCCTCAAATCCACTTTAAATCAGTAAGATGTGTAcatttactataaaatataccCTGTATTCATCATTAATAGTGCAAATTAAGGTTTAGATACTGtactttgttcatttttgtatCTGTTTAGTATATTTCaacttattaatatttgtttttctgtaagtACTGATCATTGTTTTTATAGGTATCCTTGTCATCTTTATGTGTACGCCTTAATTTGATCATCGCTGAAAGACcggtttctttctctttctcccttcATGTCAGTGTTTTTCAGTATTTGGTTTTCTTAAGCCTTTTTTCCGCATGGAACACAGTACTCGTTATTAATTAACTGTTAACATGTATCATGTAAGACATTGTTATGTATGTTCTGAAATAATTCACGTTTTCCTTCGTCTTGCATTGTGGTTCCACATAATGATTTCGTTTAATATGCACAGACAAGACTGATAGGTGAATTAAGAAAATATCAATGTCAAGAACACTTTGTATCTTTATCTTGTTTATTAAATTCAGACTGTTATACCTGA

Function

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K23480 ZNF362_384, LIN-29; zinc finger protein 362/384

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU232534 lncRNA downstream 30146 12173386 ~ 12174187 (-) True G157022
TU232551 lncRNA downstream 46019 12157402 ~ 12158314 (-) True G157036
TU232550 lncRNA downstream 48033 12151360 ~ 12156300 (-) True G157035
TU232520 lncRNA downstream 104607 12098967 ~ 12099726 (-) True G157012
TU232458 lncRNA downstream 139618 12061447 ~ 12064715 (-) True G156973
TU232655 lncRNA upstream 27830 12239934 ~ 12241416 (-) True G157100
TU232657 lncRNA upstream 30987 12243091 ~ 12243681 (-) True G157102
TU232662 lncRNA upstream 34113 12246217 ~ 12251981 (-) True G157104
TU232663 lncRNA upstream 34113 12246217 ~ 12251981 (-) False G157104
TU232665 lncRNA upstream 40627 12252731 ~ 12252936 (-) True G157106
XM_043225159.1 mRNA downstream 138161 12065347 ~ 12066172 (-) True taf13
XM_043225154.1 mRNA downstream 155542 12047116 ~ 12048791 (-) True LOC122329006
XM_043224192.1 mRNA downstream 159028 12038033 ~ 12045305 (-) True si:rp71-17i16.5
XM_043224193.1 mRNA downstream 171587 12030850 ~ 12032746 (-) True si:rp71-17i16.6
XM_043224186.1 mRNA downstream 174103 11995970 ~ 12030230 (-) False lamb2l
XM_043224674.1 mRNA upstream 172739 12384843 ~ 12440260 (-) True megf6a
XM_043224675.1 mRNA upstream 172739 12384843 ~ 12418303 (-) False megf6a
XM_043225274.1 mRNA upstream 304818 12516922 ~ 12519193 (-) True her12
XM_043224001.1 mRNA upstream 309717 12521821 ~ 12531561 (-) True LOC122328351
XM_043225400.1 mRNA upstream 333967 12546071 ~ 12553730 (-) False rnf207b
TU232479 other downstream 279683 11922844 ~ 11924650 (-) True G156985
XR_006247884.1 other downstream 402701 11799922 ~ 11801632 (-) False si:dkey-93l1.9
TU232418 other downstream 457713 11744119 ~ 11746620 (-) False LOC122328546
XR_006247899.1 other downstream 458938 11745262 ~ 11745395 (-) True LOC122329329
XR_006247903.1 other downstream 461530 11742670 ~ 11742803 (-) True LOC122329333
TU233029 other upstream 928974 13141078 ~ 13217408 (-) True G157367
TU233040 other upstream 1068152 13280256 ~ 13282327 (-) True G157373
TU233846 other upstream 2114862 14326966 ~ 14330784 (-) True G157909
TU233895 other upstream 2368990 14581094 ~ 14589593 (-) True fitm2
XR_006247853.1 other upstream 3135313 15347417 ~ 15474377 (-) False magi3a

Expression Profile