RNA id: unassigned_transcript_2582



Basic Information


Item Value
RNA id unassigned_transcript_2582
length 74
RNA type tRNA
GC content 0.59
exon number 2
gene id trnai-uau_7
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8186817 ~ 8186910 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGCGCAATCGGTCAGCGCGCGGTACTTATAATGCCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 9299 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 213492 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 350279 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 120369 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 339492 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 438016 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 441789 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 883474 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 201343 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 231822 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 254713 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 254713 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 320430 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 367597 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 512915 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 512915 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 512915 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 512915 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2581 other downstream 529 8186195 ~ 8186288 (-) True trnai-uau_6
unassigned_transcript_2580 other downstream 829 8185897 ~ 8185988 (-) True trnai-uau_5
TU230401 other downstream 908494 7276448 ~ 7278323 (-) True G155596
TU230379 other downstream 1183330 7000585 ~ 7003487 (-) False LOC122329304
TU230386 other downstream 1190008 6994181 ~ 6996809 (-) False LOC122329304
unassigned_transcript_2583 other upstream 207 8187117 ~ 8187210 (-) True trnai-uau_8
unassigned_transcript_2584 other upstream 1903 8188813 ~ 8188906 (-) True trnai-uau_9
unassigned_transcript_2585 other upstream 2200 8189110 ~ 8189203 (-) True trnai-uau_10
unassigned_transcript_2586 other upstream 2821 8189731 ~ 8189824 (-) True trnai-uau_11
unassigned_transcript_2587 other upstream 3121 8190031 ~ 8190124 (-) True trnai-uau_12