RNA id: unassigned_transcript_2590



Basic Information


Item Value
RNA id unassigned_transcript_2590
length 78
RNA type tRNA
GC content 0.58
exon number 2
gene id trnai-uau_15
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8191385 ~ 8191482 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGTGCAATCGGTCAGTCAGCGCGCGGTACTTATAATGCCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 13867 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 218060 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 354847 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 115797 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 334920 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 433444 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 437217 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 878902 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 205911 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 236390 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 259281 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 259281 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 324998 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 363025 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 508343 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 508343 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 508343 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 508343 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2589 other downstream 434 8190858 ~ 8190951 (-) True trnai-uau_14
unassigned_transcript_2588 other downstream 734 8190558 ~ 8190651 (-) True trnai-uau_13
unassigned_transcript_2587 other downstream 1261 8190031 ~ 8190124 (-) True trnai-uau_12
unassigned_transcript_2586 other downstream 1561 8189731 ~ 8189824 (-) True trnai-uau_11
unassigned_transcript_2585 other downstream 2182 8189110 ~ 8189203 (-) True trnai-uau_10
unassigned_transcript_2591 other upstream 528 8192010 ~ 8192103 (-) True trnai-uau_16
unassigned_transcript_2592 other upstream 828 8192310 ~ 8192407 (-) True trnai-uau_17
unassigned_transcript_2593 other upstream 1453 8192935 ~ 8193028 (-) True trnai-uau_18
unassigned_transcript_2594 other upstream 1750 8193232 ~ 8193325 (-) True trnai-uau_19
unassigned_transcript_2595 other upstream 2277 8193759 ~ 8193852 (-) True trnai-uau_20