RNA id: unassigned_transcript_2592



Basic Information


Item Value
RNA id unassigned_transcript_2592
length 78
RNA type tRNA
GC content 0.58
exon number 2
gene id trnai-uau_17
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8192310 ~ 8192407 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGTGCAATCGGTCAGTCAGCGCGCGGTACTTATAATGCCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 14792 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 218985 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 355772 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 114872 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 333995 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 432519 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 436292 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 877977 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 206836 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 237315 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 260206 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 260206 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 325923 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 362100 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 507418 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 507418 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 507418 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 507418 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2591 other downstream 207 8192010 ~ 8192103 (-) True trnai-uau_16
unassigned_transcript_2590 other downstream 828 8191385 ~ 8191482 (-) True trnai-uau_15
unassigned_transcript_2589 other downstream 1359 8190858 ~ 8190951 (-) True trnai-uau_14
unassigned_transcript_2588 other downstream 1659 8190558 ~ 8190651 (-) True trnai-uau_13
unassigned_transcript_2587 other downstream 2186 8190031 ~ 8190124 (-) True trnai-uau_12
unassigned_transcript_2593 other upstream 528 8192935 ~ 8193028 (-) True trnai-uau_18
unassigned_transcript_2594 other upstream 825 8193232 ~ 8193325 (-) True trnai-uau_19
unassigned_transcript_2595 other upstream 1352 8193759 ~ 8193852 (-) True trnai-uau_20
unassigned_transcript_2596 other upstream 1649 8194056 ~ 8194149 (-) True trnai-uau_21
unassigned_transcript_2597 other upstream 2176 8194583 ~ 8194676 (-) True trnai-uau_22