RNA id: unassigned_transcript_2605



Basic Information


Item Value
RNA id unassigned_transcript_2605
length 74
RNA type tRNA
GC content 0.57
exon number 2
gene id trnai-uau_30
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8199195 ~ 8199288 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGCGCAATCGGTCAGTGCGCGGTACTTATAATGTCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 21677 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 225870 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 362657 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 107991 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 327114 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 425638 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 429411 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 871096 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 213721 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 244200 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 267091 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 267091 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 332808 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 355219 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 500537 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 500537 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 500537 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 500537 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2604 other downstream 207 8198895 ~ 8198988 (-) True trnai-uau_29
unassigned_transcript_2603 other downstream 504 8198598 ~ 8198691 (-) True trnai-uau_28
unassigned_transcript_2602 other downstream 1949 8197153 ~ 8197246 (-) True trnai-uau_27
unassigned_transcript_2601 other downstream 2248 8196856 ~ 8196947 (-) True trnai-uau_26
unassigned_transcript_2600 other downstream 2773 8196329 ~ 8196422 (-) True trnai-uau_25
unassigned_transcript_2606 other upstream 434 8199722 ~ 8199815 (-) True trnai-uau_31
unassigned_transcript_2607 other upstream 1056 8200344 ~ 8200441 (-) True trnai-uau_32
unassigned_transcript_2608 other upstream 1888 8201176 ~ 8201270 (-) True trnai-uau_33
unassigned_transcript_2609 other upstream 2189 8201477 ~ 8201570 (-) True trnai-uau_34
unassigned_transcript_2610 other upstream 2716 8202004 ~ 8202095 (-) True trnai-uau_35