RNA id: unassigned_transcript_2607



Basic Information


Item Value
RNA id unassigned_transcript_2607
length 78
RNA type tRNA
GC content 0.58
exon number 2
gene id trnai-uau_32
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8200344 ~ 8200441 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGCGCAATCGGTCAGCGCGTATGCGGTACTTATAATGCCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 22826 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 227019 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 363806 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 106838 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 325961 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 424485 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 428258 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 869943 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 214870 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 245349 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 268240 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 268240 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 333957 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 354066 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 499384 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 499384 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 499384 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 499384 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2606 other downstream 529 8199722 ~ 8199815 (-) True trnai-uau_31
unassigned_transcript_2605 other downstream 1056 8199195 ~ 8199288 (-) True trnai-uau_30
unassigned_transcript_2604 other downstream 1356 8198895 ~ 8198988 (-) True trnai-uau_29
unassigned_transcript_2603 other downstream 1653 8198598 ~ 8198691 (-) True trnai-uau_28
unassigned_transcript_2602 other downstream 3098 8197153 ~ 8197246 (-) True trnai-uau_27
unassigned_transcript_2608 other upstream 735 8201176 ~ 8201270 (-) True trnai-uau_33
unassigned_transcript_2609 other upstream 1036 8201477 ~ 8201570 (-) True trnai-uau_34
unassigned_transcript_2610 other upstream 1563 8202004 ~ 8202095 (-) True trnai-uau_35
unassigned_transcript_2611 other upstream 1861 8202302 ~ 8202395 (-) True trnai-uau_36
unassigned_transcript_2612 other upstream 2388 8202829 ~ 8202922 (-) True trnai-uau_37