RNA id: unassigned_transcript_2608



Basic Information


Item Value
RNA id unassigned_transcript_2608
length 75
RNA type tRNA
GC content 0.57
exon number 2
gene id trnai-uau_33
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8201176 ~ 8201270 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGCGCAATCGGTCAGCGCTGTGGTACTTATAATGCCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 23658 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 227851 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 364638 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 106009 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 325132 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 423656 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 427429 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 869114 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 215702 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 246181 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 269072 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 269072 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 334789 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 353237 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 498555 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 498555 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 498555 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 498555 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2607 other downstream 735 8200344 ~ 8200441 (-) True trnai-uau_32
unassigned_transcript_2606 other downstream 1361 8199722 ~ 8199815 (-) True trnai-uau_31
unassigned_transcript_2605 other downstream 1888 8199195 ~ 8199288 (-) True trnai-uau_30
unassigned_transcript_2604 other downstream 2188 8198895 ~ 8198988 (-) True trnai-uau_29
unassigned_transcript_2603 other downstream 2485 8198598 ~ 8198691 (-) True trnai-uau_28
unassigned_transcript_2609 other upstream 207 8201477 ~ 8201570 (-) True trnai-uau_34
unassigned_transcript_2610 other upstream 734 8202004 ~ 8202095 (-) True trnai-uau_35
unassigned_transcript_2611 other upstream 1032 8202302 ~ 8202395 (-) True trnai-uau_36
unassigned_transcript_2612 other upstream 1559 8202829 ~ 8202922 (-) True trnai-uau_37
unassigned_transcript_2613 other upstream 3026 8204296 ~ 8204389 (-) True trnai-uau_38