RNA id: unassigned_transcript_2614



Basic Information


Item Value
RNA id unassigned_transcript_2614
length 74
RNA type tRNA
GC content 0.59
exon number 2
gene id trnai-uau_39
representative True

Chromosome Information


Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 8204596 ~ 8204689 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GCTCCAGTGGCGCAATCGGTCAGCGCGCGGTACTTATAATGCCGAGGTtgtgagttcgagcctcaccTGGAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU230649 lncRNA downstream 27078 8176699 ~ 8177518 (-) True G155737
TU230585 lncRNA downstream 231271 7973103 ~ 7973325 (-) True G155698
TU230569 lncRNA downstream 368058 7834562 ~ 7836538 (-) True G155684
TU230697 lncRNA upstream 102590 8307279 ~ 8382607 (-) True G155759
TU230759 lncRNA upstream 321713 8526402 ~ 8532927 (-) True G155803
TU230786 lncRNA upstream 420237 8624926 ~ 8625642 (-) True G155825
TU230942 lncRNA upstream 424010 8628699 ~ 8629103 (-) True G155933
XR_006247890.1 lncRNA upstream 865695 9070384 ~ 9072944 (-) False LOC122329247
XM_043225560.1 mRNA downstream 219122 7978891 ~ 7985474 (-) True gata5
XM_043225407.1 mRNA downstream 249601 7932443 ~ 7954995 (-) True LOC122329207
XM_043224019.1 mRNA downstream 272492 7922253 ~ 7932104 (-) False tm9sf4
XM_043224018.1 mRNA downstream 272492 7922253 ~ 7932104 (-) True tm9sf4
XM_043225052.1 mRNA downstream 338209 7862203 ~ 7866387 (-) True LOC122328942
XM_043225269.1 mRNA upstream 349818 8554507 ~ 8557031 (-) True LOC122329065
XM_043224373.1 mRNA upstream 495136 8699825 ~ 8777258 (-) False casz1
XM_043224374.1 mRNA upstream 495136 8699825 ~ 8777258 (-) True casz1
XM_043224375.1 mRNA upstream 495136 8699825 ~ 8748315 (-) False casz1
XM_043224372.1 mRNA upstream 495136 8699825 ~ 8748315 (-) False casz1
unassigned_transcript_2613 other downstream 207 8204296 ~ 8204389 (-) True trnai-uau_38
unassigned_transcript_2612 other downstream 1674 8202829 ~ 8202922 (-) True trnai-uau_37
unassigned_transcript_2611 other downstream 2201 8202302 ~ 8202395 (-) True trnai-uau_36
unassigned_transcript_2610 other downstream 2501 8202004 ~ 8202095 (-) True trnai-uau_35
unassigned_transcript_2609 other downstream 3026 8201477 ~ 8201570 (-) True trnai-uau_34
unassigned_transcript_2615 other upstream 434 8205123 ~ 8205216 (-) True trnai-uau_40
unassigned_transcript_2616 other upstream 734 8205423 ~ 8205516 (-) True trnai-uau_41
TU230763 other upstream 340705 8545394 ~ 8551977 (-) True G155807
TU230789 other upstream 421069 8625758 ~ 8628391 (-) True G155827
XR_006247823.1 other upstream 708373 8913062 ~ 8919725 (-) False c23h1orf127