RNA id: unassigned_transcript_2618


Basic Information

Item Value
RNA id unassigned_transcript_2618
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnan-guu_35
representative True

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 11512625 ~ 11512698 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCTCTGTGGCGCAATCGGTTAGCGCGTTCGGCTGTTAACCGAAAGGTTGGTGGTTCGAGCCCACCCAGGGAcg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU231969 lncRNA upstream 179698 11331742 ~ 11332927 (+) True G156633
TU231915 lncRNA upstream 199022 11219035 ~ 11313603 (+) True G156592
TU231931 lncRNA upstream 201138 11245551 ~ 11311487 (+) True G156599
TU231912 lncRNA upstream 269589 11211041 ~ 11243036 (+) True G156590
TU231883 lncRNA upstream 360578 11148863 ~ 11152047 (+) True G156568
TU232036 lncRNA downstream 19937 11532635 ~ 11533198 (+) True G156681
TU232037 lncRNA downstream 21892 11534590 ~ 11534917 (+) True G156682
TU232039 lncRNA downstream 26917 11539615 ~ 11540315 (+) True G156684
TU232041 lncRNA downstream 27942 11540640 ~ 11555919 (+) True G156685
TU232052 lncRNA downstream 101432 11614130 ~ 11651107 (+) True G156690
XM_043224056.1 mRNA upstream 1664 11507968 ~ 11510961 (+) True fkbpl
XM_043224671.1 mRNA upstream 67881 11441897 ~ 11444744 (+) False LOC122328759
XM_043224669.1 mRNA upstream 67881 11441937 ~ 11444744 (+) False LOC122328759
XM_043224670.1 mRNA upstream 67881 11443293 ~ 11444744 (+) True LOC122328759
XM_043225287.1 mRNA upstream 122339 11387916 ~ 11390286 (+) True emp3b
XM_043224592.1 mRNA downstream 6134 11518832 ~ 11520605 (+) True ccdc115
XM_043224589.1 mRNA downstream 8052 11520750 ~ 11524868 (+) True si:dkey-109j17.5
XM_043224590.1 mRNA downstream 14708 11527406 ~ 11529661 (+) True apobec2b
XM_043224284.1 mRNA downstream 121578 11634276 ~ 11638023 (+) True LOC122328536
XM_043224285.1 mRNA downstream 121578 11634276 ~ 11638023 (+) False LOC122328536
TU231904 other upstream 335592 11174421 ~ 11177033 (+) True G156586
XR_006247905.1 other upstream 436888 11075662 ~ 11075737 (+) True LOC122329335
XR_006247906.1 other upstream 437459 11075091 ~ 11075166 (+) True LOC122329336
TU231770 other upstream 588637 10913904 ~ 10923988 (+) True G156497
unassigned_transcript_2617 other upstream 610485 10902069 ~ 10902140 (+) True trnae-cuc_40
unassigned_transcript_2619 other downstream 1075 11513773 ~ 11513846 (+) True trnan-guu_36
unassigned_transcript_2620 other downstream 3101 11515799 ~ 11515871 (+) True trnaf-gaa_120
unassigned_transcript_2622 other downstream 5767 11518465 ~ 11518536 (+) True trnae-uuc_33
XR_006247901.1 other downstream 2541666 14054364 ~ 14054500 (+) True LOC122329331
XR_006247900.1 other downstream 2543987 14056685 ~ 14056821 (+) True LOC122329330