RNA id: TU22936


Basic Information

Item Value
RNA id TU22936
length 737
lncRNA type read_through
GC content 0.45
exon number 2
gene id G15459
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 10442 ~ 207777 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

gtttttgtttgagcCTGtttttcaagtcaagtcaagtcaagtggctttttattgtcatttcaactatatatagctgtgcagtacatagtgaaatgagacaacgtttctcctggacctggtgctacataaaGTCACGCACAACACAAAAAACTCACATACTAAGCTAAAACAAtccttagccacataaagtgcaaagtgtgcacaaaatacaaacaacaataaatatgaagtgcaaaaATGCATATGGAACAGGAAGACCATTCAGGTGTgattattgaggagtctgatggcttgtgggcaGAAACtattcagcagtctggttgtgagggaCCGAATGCTCAGGTACCTCTTTTCAGATGGCGGAGAATGGTCACTGTTTCCTcacttgaagtcaacaatcatctcctttgtcttgtcaatgttcagagatagattgttggctctacaccaagATGTtagctgctgcacctcatctctgtatgctgactcgttgttcttgctgatgagatCCACCACGGTTgtgtcatcagcgaacttgatgtgattggagctgtgcatcgctgcacagtcATGAGTgagcaaagtgaacagcagtggactgagcacacagccctgaggagctccagtgttcagtgtggtggtgctggagatgctgttcgatccggactgactgaggtctgcctgtcagaaagtccaggattcagttacagagagaggtgttcaggcccagcaggctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22955 lncRNA downstream 87667 295444 ~ 299321 (+) False LOC122330774
TU22977 lncRNA downstream 110821 318598 ~ 351269 (+) True G15478
TU23066 lncRNA downstream 113578 321355 ~ 354219 (+) True G15520
TU23071 lncRNA downstream 144187 351964 ~ 353083 (+) True G15524
TU23075 lncRNA downstream 154142 361919 ~ 367951 (+) True G15527
XM_043226671.1 mRNA downstream 7308 215085 ~ 219114 (+) True LOC122329952
XM_043227068.1 mRNA downstream 37451 245228 ~ 268255 (+) True LOC122330203
XM_043229165.1 mRNA downstream 58553 266330 ~ 278232 (+) True LOC122331655
XM_043226555.1 mRNA downstream 81665 289442 ~ 293412 (+) True LOC122329895
XM_043229411.1 mRNA downstream 242694 450471 ~ 452874 (+) True LOC122331907
TU22959 other downstream 90118 297895 ~ 299321 (+) False LOC122330774
TU23138 other downstream 345921 553698 ~ 557081 (+) True G15563
TU23155 other downstream 417588 625365 ~ 635609 (+) False LOC122330407
XR_006248020.1 other downstream 546654 754431 ~ 768972 (+) False LOC122330463
TU23504 other downstream 798218 1005995 ~ 1009303 (+) False LOC122330135

Expression Profile