RNA id: XR_006248087.1



Basic Information


Item Value
RNA id XR_006248087.1
length 651
lncRNA type inter_gene
GC content 0.44
exon number 4
gene id LOC122330774
representative False

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 55175 ~ 299321 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ttgcatgcattttattttttcaagggCTTCTAGTAATGATCCTTTCTGTAAAGGTGGTGACAAGAGCTGAAACACTTCCTGAGATGTCGGCCACCAGCTGCAGTCCAGATGATCCAGAGTTTCGGATTCTCCTGATGGACAGAGACGCTTGGGAAAAACCTCATAGGAATAAGCTCACTGGGAGAAAATTGATTTATGATCAATCTGAAGTCTGTGGGAGAGAACACGGGTTGAAGACGGGGAATGTGACTAAACGTGCATTATGTACTCGTCTCGGGACAGAGGAAAAGGAAGAAACACGGAAGCGTAGGAACATAGTAGAGCAAACGAGTGAAAGCGCATGCGCGTTAAACAAAGTTAAGATTTTTCAGTTCTCAGTATCGTATCTGAACGTAATGGTGCAATACAATCGCTCGTGCATGACTCACATCAACCAGAGGACGACGACAATTGAGGTAAGAGGAGCAAACATGCAGAACGTAACAGAGTGGTGTGAAGAGATTCATACCCGCGGGGTTCGTGTATAAGATTCTTCCTGTTTTATTGAATTACGTCAACAATCCTGACTGTGATCAGAGCTGGTATTCACAgGATGGACTGAAGGTAGCAGATCCATCAGATCCCCAGAAACTGATCTCTCCTGTTATTTCC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_006248195.1 lncRNA upstream 16190 37899 ~ 39096 (+) False LOC122331513
TU22965 lncRNA downstream 4254 62702 ~ 67697 (+) True G15468
TU22969 lncRNA downstream 15096 73544 ~ 309909 (+) False LOC122331567
TU22973 lncRNA downstream 18983 77431 ~ 346978 (+) True G15474
TU22976 lncRNA downstream 20743 79191 ~ 348398 (+) True G15477
TU22982 lncRNA downstream 40195 98643 ~ 351269 (+) False G15478
XM_043229161.1 mRNA upstream 41130 7079 ~ 14156 (+) True LOC122331645
XM_043229099.1 mRNA downstream 15274 73722 ~ 75642 (+) False LOC122331567
XM_043226671.1 mRNA downstream 156637 215085 ~ 219114 (+) True LOC122329952
XM_043227068.1 mRNA downstream 186780 245228 ~ 268255 (+) True LOC122330203
XM_043229165.1 mRNA downstream 207882 266330 ~ 278232 (+) True LOC122331655
XM_043226555.1 mRNA downstream 230994 289442 ~ 293412 (+) True LOC122329895
TU22968 other downstream 15096 73544 ~ 75634 (+) True LOC122331567
TU22959 other downstream 239447 297895 ~ 299321 (+) False LOC122330774
TU23138 other downstream 495250 553698 ~ 557081 (+) True G15563
TU23155 other downstream 566917 625365 ~ 635609 (+) False LOC122330407
XR_006248020.1 other downstream 695983 754431 ~ 768972 (+) False LOC122330463

Expression Profile