RNA id: TU22973


Basic Information

Item Value
RNA id TU22973
length 810
lncRNA type read_through
GC content 0.47
exon number 3
gene id G15474
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 77431 ~ 346978 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AAAGACTGCAGCTTCAAAACCTGCTATGAAATACTTCAGTGTACGGTCATCTCTAcaggcaagttggagctaaactcttcCAGGACAGTGGCCCTTCAGGACCAGGTTTGAACAGGACCTGGCTTTTGATTCTGTCAATGAAGATCTTTTTTGTGCATTAACAGTTAATATTTGCATCTGTCTAACCTCTTTGTCCCAGCTCCAGTTCTTTCTCTTGCGAAGACACGGATCTTGTCGGACACTCTTGAAAGTCCTGCAGGATGTCCTGGAACCCTAATCTTTAGTGCATCTCTGACCTGATTGTACAGTTGCTCATCTTGTGGTCTTGGGTGTTCCTGCAGGATGTCCTGGAACCTAATCTTTAGTGCATCTCTGACCTGATTGTACAGTTGCTCATCTTGTGGTCTTAGGTGTTCCTGCAGACAGCGATCACGGGCCATTGGGTCCACATAAACCTCGTGGTTCACCATTTGAGTGGCAATGAAGTGCACGCGCTGGCGCTTTTTCCAGATTTCATATCTCTCATTTTGGCTCTCAGATGTCTCAGCCTTGAGGTATCTCACAAGTGCATCTCAAGCTCCTTCACAAACTCTCCATATAAATCAGCATTGTAATCCACGTAGTGCTCATTTGagctgAAGTAGGCCACCATTGTTTCAATTGCAGTTTGTTGAGTATTTCTGAGAGGGATCACAAGGTCCTGCATCAGGTTGTCCAGCTGTTCATCATAGCCCCCACATCTCTCAGCAGCTCCTGCAGAACGCTCGCGGTGGAACCCAAGGAGCCCGTTGTTAAAGACATGCTGGCCTC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU22965 lncRNA upstream 9734 62702 ~ 67697 (+) True G15468
XR_006248087.1 lncRNA upstream 18983 55286 ~ 58448 (+) False LOC122330774
XR_006248195.1 lncRNA upstream 38335 37899 ~ 39096 (+) False LOC122331513
TU23071 lncRNA downstream 4986 351964 ~ 353083 (+) True G15524
TU23075 lncRNA downstream 14941 361919 ~ 367951 (+) True G15527
TU23049 lncRNA downstream 74557 421535 ~ 422898 (+) True G15507
XR_006248088.1 lncRNA downstream 107788 454766 ~ 456666 (+) True LOC122330779
TU23100 lncRNA downstream 131461 478439 ~ 480300 (+) True G15546
XM_043229099.1 mRNA upstream 1789 73722 ~ 75642 (+) False LOC122331567
XM_043229161.1 mRNA upstream 63275 7079 ~ 14156 (+) True LOC122331645
XM_043229411.1 mRNA downstream 103493 450471 ~ 452874 (+) True LOC122331907
XM_043229536.1 mRNA downstream 222346 569324 ~ 571953 (+) True LOC122332242
XM_043226167.1 mRNA downstream 224960 571938 ~ 610361 (+) False LOC122329695
XM_043226164.1 mRNA downstream 224961 571939 ~ 610361 (+) True LOC122329695
XM_043227369.1 mRNA downstream 278386 625364 ~ 636239 (+) True LOC122330407
TU22968 other upstream 1797 73544 ~ 75634 (+) True LOC122331567
TU23138 other downstream 206720 553698 ~ 557081 (+) True G15563
TU23155 other downstream 278387 625365 ~ 635609 (+) False LOC122330407
XR_006248020.1 other downstream 407453 754431 ~ 768972 (+) False LOC122330463
TU23504 other downstream 659017 1005995 ~ 1009303 (+) False LOC122330135
TU23529 other downstream 701025 1048003 ~ 1049260 (+) False LOC122330066

Expression Profile