Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU23049 |
| length | 1308 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G15507 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 421535 ~ 422898 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0030163 | protein catabolic process | biological_process |
| GO:0009057 | macromolecule catabolic process | biological_process |
| GO:0044257 | cellular protein catabolic process | biological_process |
| GO:0044265 | cellular macromolecule catabolic process | biological_process |
| GO:0051603 | proteolysis involved in cellular protein catabolic process | biological_process |
| GO:0046980 | tapasin binding | molecular_function |
| id | description |
|---|---|
| ko04612 | Antigen processing and presentation |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU23075 | lncRNA | upstream | 53584 | 361919 ~ 367951 (+) | True | G15527 |
| TU23066 | lncRNA | upstream | 67316 | 321355 ~ 354219 (+) | True | G15520 |
| TU23071 | lncRNA | upstream | 68452 | 351964 ~ 353083 (+) | True | G15524 |
| TU22982 | lncRNA | upstream | 70266 | 98643 ~ 351269 (+) | False | G15478 |
| XR_006248088.1 | lncRNA | downstream | 31868 | 454766 ~ 456666 (+) | True | LOC122330779 |
| TU23100 | lncRNA | downstream | 55541 | 478439 ~ 480300 (+) | True | G15546 |
| TU23110 | lncRNA | downstream | 97852 | 520750 ~ 522672 (+) | True | G15550 |
| TU23164 | lncRNA | downstream | 254168 | 677066 ~ 678095 (+) | True | G15586 |
| XR_006248068.1 | lncRNA | downstream | 272853 | 695751 ~ 697558 (+) | True | LOC122330711 |
| XM_043226555.1 | mRNA | upstream | 128123 | 289442 ~ 293412 (+) | True | LOC122329895 |
| XM_043229165.1 | mRNA | upstream | 143303 | 266330 ~ 278232 (+) | True | LOC122331655 |
| XM_043227068.1 | mRNA | upstream | 153280 | 245228 ~ 268255 (+) | True | LOC122330203 |
| XM_043226671.1 | mRNA | upstream | 202421 | 215085 ~ 219114 (+) | True | LOC122329952 |
| XM_043229099.1 | mRNA | upstream | 345893 | 73722 ~ 75642 (+) | False | LOC122331567 |
| XM_043229411.1 | mRNA | downstream | 27573 | 450471 ~ 452874 (+) | True | LOC122331907 |
| XM_043229536.1 | mRNA | downstream | 146426 | 569324 ~ 571953 (+) | True | LOC122332242 |
| XM_043226167.1 | mRNA | downstream | 149040 | 571938 ~ 610361 (+) | False | LOC122329695 |
| XM_043226164.1 | mRNA | downstream | 149041 | 571939 ~ 610361 (+) | True | LOC122329695 |
| XM_043227369.1 | mRNA | downstream | 202466 | 625364 ~ 636239 (+) | True | LOC122330407 |
| TU22959 | other | upstream | 122214 | 297895 ~ 299321 (+) | False | LOC122330774 |
| TU22968 | other | upstream | 345901 | 73544 ~ 75634 (+) | True | LOC122331567 |
| TU23138 | other | downstream | 130800 | 553698 ~ 557081 (+) | True | G15563 |
| TU23155 | other | downstream | 202467 | 625365 ~ 635609 (+) | False | LOC122330407 |
| XR_006248020.1 | other | downstream | 331533 | 754431 ~ 768972 (+) | False | LOC122330463 |
| TU23504 | other | downstream | 583097 | 1005995 ~ 1009303 (+) | False | LOC122330135 |
| TU23529 | other | downstream | 625105 | 1048003 ~ 1049260 (+) | False | LOC122330066 |
