Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU24151 |
| length | 1128 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G16233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 2028394 ~ 2030843 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0044260 | cellular macromolecule metabolic process | biological_process |
| GO:1903047 | mitotic cell cycle process | biological_process |
| GO:0006259 | DNA metabolic process | biological_process |
| GO:0000278 | mitotic cell cycle | biological_process |
| GO:0044424 | obsolete intracellular part | cellular_component |
| GO:0005874 | microtubule | cellular_component |
| GO:0099513 | polymeric cytoskeletal fiber | cellular_component |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043228 | non-membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043232 | intracellular non-membrane-bounded organelle | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU23819 | lncRNA | upstream | 39125 | 1776986 ~ 1989269 (+) | True | G16028 |
| TU23818 | lncRNA | upstream | 48685 | 1770757 ~ 1979709 (+) | True | G16027 |
| XR_006248070.1 | lncRNA | upstream | 84665 | 1942689 ~ 1943729 (+) | True | LOC122330717 |
| TU23808 | lncRNA | upstream | 137367 | 1871280 ~ 1891027 (+) | False | G16017 |
| TU23807 | lncRNA | upstream | 154874 | 1871280 ~ 1873520 (+) | True | G16017 |
| TU24161 | lncRNA | downstream | 12808 | 2043651 ~ 2046384 (+) | True | G16243 |
| TU24140 | lncRNA | downstream | 19342 | 2050185 ~ 2056000 (+) | True | G16226 |
| TU24129 | lncRNA | downstream | 25838 | 2056681 ~ 2320138 (+) | False | G16222 |
| TU24120 | lncRNA | downstream | 32722 | 2063565 ~ 2069715 (+) | True | G16219 |
| TU24156 | lncRNA | downstream | 44317 | 2075160 ~ 2078850 (+) | True | G16238 |
| XM_043226579.1 | mRNA | upstream | 17963 | 2002679 ~ 2010431 (+) | True | rangap1a |
| XM_043230813.1 | mRNA | upstream | 86601 | 1925747 ~ 1941793 (+) | True | LOC122333258 |
| XM_043227073.1 | mRNA | upstream | 157784 | 1867624 ~ 1870610 (+) | True | LOC122330213 |
| XM_043230436.1 | mRNA | upstream | 298397 | 1728370 ~ 1729997 (+) | True | LOC122332958 |
| XM_043226184.1 | mRNA | upstream | 300701 | 1711295 ~ 1727693 (+) | True | LOC122329718 |
| XM_043235918.1 | mRNA | downstream | 100375 | 2131218 ~ 2140821 (+) | True | si:ch211-106h11.3 |
| XM_043230556.1 | mRNA | downstream | 129503 | 2160346 ~ 2165693 (+) | True | LOC122333054 |
| XM_043235185.1 | mRNA | downstream | 230767 | 2261610 ~ 2267508 (+) | True | LOC122341668 |
| XM_043235186.1 | mRNA | downstream | 236745 | 2267588 ~ 2270464 (+) | True | LOC122341669 |
| XM_043230952.1 | mRNA | downstream | 262460 | 2293303 ~ 2296045 (+) | True | LOC122333376 |
| unassigned_transcript_275 | other | upstream | 162609 | 1865713 ~ 1865785 (+) | True | trnar-ccu_2 |
| unassigned_transcript_274 | other | upstream | 377666 | 1650656 ~ 1650728 (+) | True | trnar-ccu_1 |
| TU23775 | other | upstream | 381862 | 1644778 ~ 1646532 (+) | False | G16003 |
| TU23777 | other | upstream | 381966 | 1644778 ~ 1646428 (+) | False | G16003 |
| TU23799 | other | upstream | 405000 | 1620931 ~ 1623394 (+) | True | trnar-ccu |
| TU24128 | other | downstream | 25838 | 2056681 ~ 2063784 (+) | False | G16222 |
| TU24131 | other | downstream | 25838 | 2056681 ~ 2063784 (+) | True | G16222 |
| TU24132 | other | downstream | 27834 | 2058677 ~ 2063784 (+) | False | G16222 |
| TU24133 | other | downstream | 81194 | 2112037 ~ 2114339 (+) | True | G16223 |
| TU24191 | other | downstream | 130002 | 2160845 ~ 2165614 (+) | False | LOC122333054 |
