RNA id: TU24318


Basic Information

Item Value
RNA id TU24318
length 1084
RNA type TUCP
GC content 0.47
exon number 5
gene id sumo2b
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 2641146 ~ 2646756 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CGCGGACGTGCGCGTCCCCGCGGAGTCTTTGTGTGGCGGCGTAGAGAAGCGCAAATACAATAACCATGGCCGACGAGAAACCCAAGGAGGGGGTGAAGACGGAGAACAACGACCACATCAATCTGAAGGTGGCGGGACAGGACGGGTCGGTGGTCCAGTTTAAAATCAAGAGACACACACCCCTCAGCAAGCTTATGAAGGCCTACTGTGAGAGACAGGGACTGACGATGAGGCAGATTCGGTTCCGGTTTGACGGACAGCCCATTAACGAAACAGACACGCCCGCACAGTTGGAAATGGAGGATGAAGACACAATCGACGTTTTCCAGCAACAGACAGGAGGACACATCTGAATCAGACGACTCTAGCGACCCCCGGCccgtctctctctatctctctctctctatctatctctctctctctatctctctatgtctctctatcgctctctatctctctctctctctctctatctctctatgtctctctatcgctctctatctatctctctctctctctctctatgtctctctatcgctctctctctgttcctggTTCTCCTCATGGTCATCTGTAACTGCTGTTGTATAGTGTTTTCAGttcatcatgtttttctttcgttttgtACATAAGGGTTTCCGCTACAGTAATTATTACATTGGGATTGTTGATTGCCGTAAAATCTGCCGTGTCAAGCCCGAGTCTAGACCATCATCTCTGTACAGACCAACTAATACACGTTTCCCCTTAACAATCATTGAGGAGGAGAGCCGCGTGCGCGGGTTCAGGGTTTCGTTCCGGTCCCGGACACGAGCACGCGGGCCTTTTCTTTCGAAATCTCGTTTCAGGAAGTGCTCTGCTGCGCTTTAAGCAGACGAACCTGCAGCCGGTTCAGATTGAGTTTCTGTTTTCCATTCAGACCAATTGGttttacaactttttatttttttttgtagtggtCATGTACAGTGCGTAACTTGTGTTAAACATGTTTTGACTCGAGTACGAACGAGGGAGTTCATGTTTCAGACAAGTCAAGCATCTGTCTGTATTGTCTAATctcttgttaaaataaaatattctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU24310 lncRNA upstream 6832 2631795 ~ 2634380 (+) True G16357
TU24311 lncRNA upstream 38675 2602194 ~ 2602537 (+) True G16358
TU24312 lncRNA upstream 38872 2601838 ~ 2602340 (+) False G16358
TU24291 lncRNA upstream 75369 2564488 ~ 2565843 (+) True G16344
TU24283 lncRNA upstream 94309 2516512 ~ 2546903 (+) True G16337
TU24543 lncRNA downstream 14125 2660875 ~ 2667259 (+) True G16484
TU24552 lncRNA downstream 52530 2699280 ~ 2702201 (+) True G16492
TU24590 lncRNA downstream 629649 3276399 ~ 3276980 (+) True G16529
TU24622 lncRNA downstream 732531 3379281 ~ 3379545 (+) True G16549
TU24633 lncRNA downstream 737798 3384548 ~ 3476586 (+) True G16556
XM_043235025.1 mRNA upstream 14092 2617272 ~ 2627120 (+) True gga3b
XM_043235026.1 mRNA upstream 14092 2617272 ~ 2627120 (+) False gga3b
XM_043235018.1 mRNA upstream 25239 2609239 ~ 2615973 (+) True LOC122341564
XM_043231017.1 mRNA upstream 56234 2579542 ~ 2584978 (+) True LOC122333418
XM_043235015.1 mRNA upstream 98674 2513221 ~ 2542538 (+) True evplb
XM_043235058.1 mRNA downstream 739 2647489 ~ 2658946 (+) True jpt1b
XM_043235030.1 mRNA downstream 38860 2685610 ~ 2691262 (+) False LOC122341572
XM_043235036.1 mRNA downstream 622843 3269593 ~ 3272366 (+) True LOC122341575
XM_043231103.1 mRNA downstream 630419 3277169 ~ 3280555 (+) True LOC122333469
XM_043231127.1 mRNA downstream 754676 3401426 ~ 3407130 (+) True LOC122333486
TU24296 other upstream 72213 2568084 ~ 2568999 (+) True G16347
XR_006250539.1 other upstream 76257 2564887 ~ 2564955 (+) True LOC122342193
TU24191 other upstream 475598 2160845 ~ 2165614 (+) False LOC122333054
TU24133 other upstream 526873 2112037 ~ 2114339 (+) True G16223
TU24131 other upstream 577428 2056681 ~ 2063784 (+) True G16222
TU24591 other downstream 636240 3282990 ~ 3283656 (+) True G16530
TU24613 other downstream 674070 3320820 ~ 3323054 (+) True G16541
XR_006250493.1 other downstream 863326 3510076 ~ 3525401 (+) False mmd
TU24749 other downstream 1162458 3809208 ~ 3813303 (+) False LOC122332297
TU24797 other downstream 1300873 3947623 ~ 3985611 (+) True G16667

Expression Profile