RNA id: TU25994


Basic Information

Item Value
RNA id TU25994
length 552
RNA type TUCP
GC content 0.44
exon number 3
gene id fbxw9
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6098201 ~ 6103626 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CCGGAGAAGTGTAGTGTTGACAAGCGTCGCTTTGAGATCAATGTAACTGTAATCATATTTTCTCCGATGATCAAAAATACGTTTCGCGCTTCTATGATTTTCCTTTTACATTCTCTGCCTACTTTTAACAAGCGTGAGGAAAAACTTAAGTAAAGACACGGCGAACACAGATGATTTTGTGCAGTGTCATatcaaaatgatcaataatttataacaaaaacaGTCGGATGAGAAATGTGGATTGTTTATTCTTTCAGTCTGTCTTTGAATACAAggattttttgaataaataagAAAGTGATTCAGCCAATGTCGAGAACAAGCGTCGCTCTGGAGGATGAGGAGAAGCAGCAGAGATGCCCTGCTGATGCCGGTCCACCCGATTTCATCCCAGACACCCCACACTTCTTACCCGAGAGATTGAATTTGGAAGCATCCGTCAGCGCTATGGAGACAAGCCCCTCCCCTTCCAGCAACGGAACCAACCTCCTGTCGTTGCCGTGGGAGATAGTTACCCAGATAGCCTCACATCTCCCAGCACAGTGTGTCATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU25990 lncRNA upstream 135313 5960536 ~ 5962888 (+) True LOC122341474
TU25984 lncRNA upstream 150493 5945293 ~ 5947708 (+) True G17405
TU25885 lncRNA upstream 345921 5751981 ~ 5752280 (+) True G17337
TU25848 lncRNA upstream 361076 5735089 ~ 5737125 (+) True G17312
TU25863 lncRNA upstream 402565 5690535 ~ 5695636 (+) True G17322
TU25995 lncRNA downstream 14054 6113206 ~ 6113606 (+) True G17412
TU25997 lncRNA downstream 16552 6115704 ~ 6116092 (+) True G17414
TU26066 lncRNA downstream 168245 6267397 ~ 6267696 (+) True G17449
TU26183 lncRNA downstream 217116 6316268 ~ 6316621 (+) True G17521
TU26190 lncRNA downstream 247384 6346536 ~ 6353825 (+) True G17528
XM_043234866.1 mRNA upstream 136869 5957403 ~ 5961332 (+) False LOC122341474
XM_043234818.1 mRNA upstream 143559 5949149 ~ 5954642 (+) True LOC122341440
XM_043234819.1 mRNA upstream 143559 5949149 ~ 5954642 (+) False LOC122341440
XM_043234817.1 mRNA upstream 143559 5949149 ~ 5954642 (+) False LOC122341440
XM_043234842.1 mRNA upstream 155615 5937432 ~ 5942586 (+) True slc25a19
XM_043234867.1 mRNA downstream 7281 6106433 ~ 6110339 (+) True dhps
XM_043234810.1 mRNA downstream 87656 6186808 ~ 6195038 (+) True LOC122341437
XM_043234830.1 mRNA downstream 113439 6212591 ~ 6265327 (+) True prkar1b
XM_043234829.1 mRNA downstream 113439 6212591 ~ 6265327 (+) False prkar1b
XM_043234831.1 mRNA downstream 113439 6212591 ~ 6265327 (+) False prkar1b
TU25833 other upstream 499969 5597099 ~ 5598232 (+) True G17302
XR_006248137.1 other upstream 532227 5557008 ~ 5565974 (+) True LOC122331163
TU25292 other upstream 1191235 4905656 ~ 4906966 (+) True G16981
TU25278 other upstream 1551634 4510737 ~ 4546567 (+) False G16978
TU25277 other upstream 1564903 4470732 ~ 4533298 (+) True G16978
TU26034 other downstream 93588 6192740 ~ 6195022 (+) False LOC122341437
TU26037 other downstream 93588 6192740 ~ 6195022 (+) False LOC122341437
TU26040 other downstream 93588 6192740 ~ 6195022 (+) False LOC122341437
TU26041 other downstream 93588 6192740 ~ 6195022 (+) False LOC122341437
TU26266 other downstream 405763 6504915 ~ 6556750 (+) False G17590

Expression Profile