RNA id: TU26034



Basic Information


Item Value
RNA id TU26034
length 1083
RNA type TUCP
GC content 0.43
exon number 7
gene id LOC122341437
representative False

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 6186808 ~ 6195038 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGCTTCCTGACCAGACGCCTGCTGAAAACGGACAGAGTCAAACACCTGCGGCAGACCGTGCACGACACGCGAGAGTTCATCCGCTCCTTCAGCGCCGACGGCCCCCAGAGGAGCCGAGCTCTGTCGGAGCAGGACGTCTCCCTGCAGGAGCGCGTCAGGGCCCAGTTACGCGCGGCCCTGTTCGACGTCCACGACGTCTTCTTCTCGACGACTCTCGAGGAGCGCCTGTCTCTGCTGCAGCAGGACCGGGAGCTGCGCGCCGAGAGGAGGCTCAGAGAGATGGAAAAAGCAAAAAGCCCCAAGGACAAGGTGATTCTGTCGGCTGCTACCCAGAAGTCACTTGATAGAAAGAAGAGAGTTGGTGAATCTCCAAGTCAGACCAGAAAAGCTCAGAAGACCAAGAGTCCTCCTACAAAAAGGATCCTGCAGCCCAGCCAGGGCCAGAACGCTCCCGTTTCAGGCCAGCAGCTCCTGCGCCGCGGGAGTTACAAGAAGACCCCAGAAGAAAGGGTTCAGCATTCGGAGAGGCTGAAGAAACAGCATTCGCTGGGTTGACTTCACGCACGCTTCTCAACCGAACATGAACAAATAATACTGCGCTAGTCACACTTCTAAAAATACTCCCCTGCTAGCCATCTCATTGAATTATGACCATTTAAACGTAACTGATATCTAGTTCTTCCCATTATTCTACTACATACTGCATATGAATATAGAATTAGTAGAGGTTGCATAATCGTTATACtaaattaccattttaaaaattcttacATGTCCTCCAAATAAGAGGCCTGCATTAACACAGAGAAGTTAATGCTGCTTTATTGCTGTTGATACTAATCAAAATGTCAGTAATATTGCCAGAATGTCAAATAGTAGAATAAGAACACACGCCTATGAAGAGTGCCGACgtttcttcagaaatgattgTATTTGATAGCACTTGAACTGAATTTGTGCTTTTAATCATAATACTTTCCTTCAGTACTTATTACTGCAATCATATCAGTTGTTCATGAATGTAGTCGCTCTTGCCTTGCAAACTTAAAGACGCACCTGAGCATtaagaaatgtgaaataaac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU25997 lncRNA upstream 76648 6115704 ~ 6116092 (+) True G17414
TU25995 lncRNA upstream 79134 6113206 ~ 6113606 (+) True G17412
TU25990 lncRNA upstream 229852 5960536 ~ 5962888 (+) True LOC122341474
TU25984 lncRNA upstream 245032 5945293 ~ 5947708 (+) True G17405
TU25885 lncRNA upstream 440460 5751981 ~ 5752280 (+) True G17337
TU26066 lncRNA downstream 72375 6267397 ~ 6267696 (+) True G17449
TU26183 lncRNA downstream 121246 6316268 ~ 6316621 (+) True G17521
TU26190 lncRNA downstream 151514 6346536 ~ 6353825 (+) True G17528
TU26186 lncRNA downstream 222640 6417662 ~ 6418363 (+) True G17524
TU26226 lncRNA downstream 241710 6436732 ~ 6436968 (+) True G17560
XM_043234867.1 mRNA upstream 82401 6106433 ~ 6110339 (+) True dhps
XM_043234865.1 mRNA upstream 89114 6098430 ~ 6103626 (+) True fbxw9
XM_043234866.1 mRNA upstream 231408 5957403 ~ 5961332 (+) False LOC122341474
XM_043234818.1 mRNA upstream 238098 5949149 ~ 5954642 (+) True LOC122341440
XM_043234819.1 mRNA upstream 238098 5949149 ~ 5954642 (+) False LOC122341440
XM_043234830.1 mRNA downstream 17569 6212591 ~ 6265327 (+) True prkar1b
XM_043234829.1 mRNA downstream 17569 6212591 ~ 6265327 (+) False prkar1b
XM_043234831.1 mRNA downstream 17569 6212591 ~ 6265327 (+) False prkar1b
XM_043234832.1 mRNA downstream 23299 6218321 ~ 6265327 (+) False prkar1b
XM_043234852.1 mRNA downstream 80876 6275898 ~ 6293394 (+) False pdgfab
TU25994 other upstream 93588 6098201 ~ 6099152 (+) False fbxw9
TU25833 other upstream 594508 5597099 ~ 5598232 (+) True G17302
XR_006248137.1 other upstream 626766 5557008 ~ 5565974 (+) True LOC122331163
TU25292 other upstream 1285774 4905656 ~ 4906966 (+) True G16981
TU25278 other upstream 1646173 4510737 ~ 4546567 (+) False G16978
TU26266 other downstream 309893 6504915 ~ 6556750 (+) False G17590
TU26270 other downstream 309893 6504915 ~ 6556750 (+) True G17590
XR_006250506.1 other downstream 1461010 7656032 ~ 7725519 (+) False baiap2a
unassigned_transcript_276 other downstream 1754739 7949761 ~ 7950417 (+) True LOC122331768
TU26829 other downstream 1754782 7949804 ~ 7950310 (+) False LOC122331768

Expression Profile