RNA id: TU26584


Basic Information

Item Value
RNA id TU26584
length 1692
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G17808
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7310174 ~ 7314152 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GAGGGGAGGCTAGGGGTTTCGAGGGACACGTCGTGGCGGGTCAGCACGAGAGGGGTTTTAATGTAGAGGGGTGAGGCAGTGGCGTCAGGGGGAGCGGCATGCGGCGCGTCACACACGGGGCCGTGTTTGGAAAAGTGCAGGCAGCTAGGCTTGGGGTTGGAGTTGATATCgagtgaggaagaggaagaggaggaggaagaggacggTGGTGGTTGGGGCTGGGGAAGGGGTGGGCCAAAGCCCACCCAGCGCAGGGGCGGAGGAGGGGAGCCGGGAGGCTGGGATTCGGGCCCGGGGGCGACGGGCCGAGCGCAGGGAGGGGGCTTGGGGTAGAAGTGGTGAGGGCCGGGATGGGAGGACGAGGAAGGGTACGGAGGGGGTGGCCGCTCCTCCACGTGGGACGAATAGACATGTGAGGAATCCGGCCGATTGGGCGACACGTCGTCTGAGCTGCGTCTCCAGGAGGGGGGGTGGGGATTGGAGATGTGGCCAGCTCACCGGGCTGCTCAGTGATCAGGGTGTCTGCCGGAGAGCCGGGCGGCTGGGCGCTGGGAGGCGTGGATGAGGCTTTGCGGGCCAGTGTGGACGAACTTTTGCCCTTCACCCACGATGTGTCCATGACTCTGACACCCACGCTGCCCACATAAGACCCACAAACCATCAAACACAACCACTGAAGGAAACCACAACAACTAGGTGTACTTTACAGAAACTTTAACCCTTGGGTGATTGTCTTTAACTCATAATTACACATAATTCCATTCGACCGCTCTCTACATCTCAAGTGTGCTTCTTTTGTTTACGATGTAATATTAAATTTCTAAAAGACTGACAAAAGTTGCCAAGGTCATTTAAAAGAGAGGCTTATTAGGATTATGTTATTACAGAAATACTACATTTCCCTTAcagaaataaaggtttttgtcatttaatgatTTACATCAAAACACTTCATAGTAACTTGcgtaattacaattaatattaattactgtaattgttACAAGATATAATTAGAGAACAGTATAATGATTTTGATTCAAATTACAGTTTAGGATTGGtaagtttttattaaagaagAATCTTATGGTCACCGAGACCATgctatttgatcaaaattaaattacaaacagTAAATTAGTGAAACATTActagaatgtaaaataacaaaaatttctaatttattcctgtgattcaaagctgtatttttatcatcattactccaatctttagtatcacatgatctttcataAATCAATCTAATAACTGATTTGCAGATTTATTACTACTACCAATGTTGAAAAAAGtctgatttatatttatgtaatattatttttgtaataataaaatatataatggttttgtaatattacagtgtttttgtgaaataaaaatctttgtaattttttgaaaatgttttataattaaaactatgcattttattattaattaaatatttaagtgttcTTTAATAGTCACTTTTGATCTACTCAATGCGCTCTTGCTTAATGTATCAAATAAACAACCTTCACAAGAAACaagaaatatatttgaacataCATGCACGTTTTAGCaatacagaaatgaaatgattgttaattatgttattaaatcCACGGTATAACAGAAAAGGTGAACGGTACCTTTGAATTTTCCTAATGCTGCATTGAGTGTGGATAAAACAATGAGTTTAGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU26582 lncRNA upstream 27228 7265343 ~ 7282946 (+) True G17806
TU26565 lncRNA upstream 43452 7194782 ~ 7266722 (+) True G17791
TU26448 lncRNA upstream 333909 6922196 ~ 6976265 (+) True G17704
TU26442 lncRNA upstream 407013 6902746 ~ 6903161 (+) True G17699
TU26412 lncRNA upstream 462568 6846938 ~ 6847606 (+) True G17683
TU26660 lncRNA downstream 78439 7392591 ~ 7392872 (+) True G17861
TU26661 lncRNA downstream 84087 7398239 ~ 7398465 (+) True G17862
TU26666 lncRNA downstream 95086 7409238 ~ 7409540 (+) True G17867
TU26695 lncRNA downstream 271321 7585473 ~ 7591526 (+) False LOC122331592
TU26696 lncRNA downstream 271321 7585473 ~ 7591526 (+) True LOC122331592
XM_043234879.1 mRNA upstream 9441 7294957 ~ 7300733 (+) True LOC122341489
XM_043228323.1 mRNA upstream 29138 7270950 ~ 7281036 (+) True slc16a5b
XM_043228332.1 mRNA upstream 29138 7270990 ~ 7281036 (+) False slc16a5b
XM_043228315.1 mRNA upstream 29138 7271007 ~ 7281036 (+) False slc16a5b
XM_043235263.1 mRNA upstream 58251 7241697 ~ 7251923 (+) True metrnla
XM_043225518.1 mRNA downstream 48764 7362916 ~ 7374464 (+) True hs3st3b1a
XM_043229148.1 mRNA downstream 269202 7583354 ~ 7585598 (+) False LOC122331592
XM_043228545.1 mRNA downstream 305498 7619650 ~ 7648946 (+) True ttyh2l
XM_043229085.1 mRNA downstream 335477 7649629 ~ 7655190 (+) True chmp6a
XM_043235702.1 mRNA downstream 341879 7656031 ~ 7719941 (+) False baiap2a
TU26266 other upstream 753424 6504915 ~ 6556750 (+) False G17590
TU26270 other upstream 753424 6504915 ~ 6556750 (+) True G17590
TU26037 other upstream 1115152 6192740 ~ 6195022 (+) False LOC122341437
XR_006250506.1 other downstream 341880 7656032 ~ 7725519 (+) False baiap2a
unassigned_transcript_276 other downstream 635609 7949761 ~ 7950417 (+) True LOC122331768
TU26829 other downstream 635652 7949804 ~ 7950310 (+) False LOC122331768
TU26831 other downstream 636702 7950854 ~ 7951364 (+) True G17985
TU26833 other downstream 645919 7960071 ~ 7962295 (+) False LOC122341279

Expression Profile