RNA id: TU26666



Basic Information


Item Value
RNA id TU26666
length 303
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G17867
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7409238 ~ 7409540 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ATCACATGCGCGCTAGCCGGGAGTCAAGAGTTcacaaaatgtttgtatttcagACAGGCAGAGAAAGATCTTCATCACTGAGGCATGagaatatatacacataccAGCAAATATTAAAGGGGCCGTATtctgttataaatgtttttttagtattattttctACACTTAAACCCCCTAAAAATGTCACTCAGCTTCATTTATACACTTTTCACCCTTGTGCCTAcccttttttttaagcaagttGTTTTTTATCATGTACATATAAgactgtatgtacagtatatagtcactttttttaataat

Function


GO:

id name namespace
GO:0050878 regulation of body fluid levels biological_process
GO:0001775 cell activation biological_process
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0007599 hemostasis biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU26661 lncRNA upstream 10773 7398239 ~ 7398465 (+) True G17862
TU26660 lncRNA upstream 16366 7392591 ~ 7392872 (+) True G17861
TU26584 lncRNA upstream 95086 7310174 ~ 7314152 (+) True G17808
TU26582 lncRNA upstream 126292 7265343 ~ 7282946 (+) True G17806
TU26565 lncRNA upstream 142516 7194782 ~ 7266722 (+) True G17791
TU26695 lncRNA downstream 175933 7585473 ~ 7591526 (+) False LOC122331592
TU26696 lncRNA downstream 175933 7585473 ~ 7591526 (+) True LOC122331592
TU26730 lncRNA downstream 262163 7671703 ~ 7728184 (+) True G17912
TU26754 lncRNA downstream 410770 7820310 ~ 7820640 (+) False slc27a1a
TU26758 lncRNA downstream 415646 7825186 ~ 7825842 (+) True G17928
XM_043225518.1 mRNA upstream 34774 7362916 ~ 7374464 (+) True hs3st3b1a
XM_043234879.1 mRNA upstream 108505 7294957 ~ 7300733 (+) True LOC122341489
XM_043228323.1 mRNA upstream 128202 7270950 ~ 7281036 (+) True slc16a5b
XM_043229148.1 mRNA downstream 173814 7583354 ~ 7585598 (+) False LOC122331592
XM_043228545.1 mRNA downstream 210110 7619650 ~ 7648946 (+) True ttyh2l
XM_043229085.1 mRNA downstream 240089 7649629 ~ 7655190 (+) True chmp6a
XM_043235702.1 mRNA downstream 246491 7656031 ~ 7719941 (+) False baiap2a
XM_043235706.1 mRNA downstream 246492 7656032 ~ 7725519 (+) True baiap2a
TU26266 other upstream 852488 6504915 ~ 6556750 (+) False G17590
TU26270 other upstream 852488 6504915 ~ 6556750 (+) True G17590
TU26037 other upstream 1214216 6192740 ~ 6195022 (+) False LOC122341437
XR_006250506.1 other downstream 246492 7656032 ~ 7725519 (+) False baiap2a
unassigned_transcript_276 other downstream 540221 7949761 ~ 7950417 (+) True LOC122331768
TU26829 other downstream 540264 7949804 ~ 7950310 (+) False LOC122331768
TU26831 other downstream 541314 7950854 ~ 7951364 (+) True G17985
TU26833 other downstream 550531 7960071 ~ 7962295 (+) False LOC122341279

Expression Profile