RNA id: TU26765



Basic Information


Item Value
RNA id TU26765
length 630
lncRNA type inter_gene
GC content 0.31
exon number 1
gene id G17934
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7842339 ~ 7842968 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCTGTGTGTAATGCTGTAGATCGTAGCAGAAATATATAGTCAGGTATGGCTGTGTATTACTCTGTAATGTAGTTTTTGTCCCACTAACTAATTTGTTTCTTCTGGTAAACCAAAGGCACGGCCTTTTATGGTGGTTGTTGACATCTGGGCTAAactcttaaatgttttaaaacaagtttcttctgctcaccaaggctgcataaATTTGAGGAAAAtgactaatattgtgaaatattattacaggtAACAATGTCTGAGCTCCATATCCATTTAGCTTCCATATTcccatatattaaaaaataatttatttccgtgatggcaaagatgaattttcagcccTCGGTTTccacgtgattttttttttaatgaaaatgttgtgcGGCAAAaggttttcaacactgatattaagaaacatttcttaaaatgtaaatcagaatgatttcctGAAAAATCGTGACACTGATGACTAAagtctgaaaattcagctttgcatcagaaataaaatagaGTTATTctaaattgtaatgatatttcagaacattcatgtttttactgtatttttgatcaaataaatgcaaacaaatttactttttaatggaTATGGTCTTGGATATATCTGGataaaaccta

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU26763 lncRNA upstream 670 7841043 ~ 7841669 (+) False LOC122341274
TU26760 lncRNA upstream 12479 7829484 ~ 7829860 (+) True G17930
TU26758 lncRNA upstream 16497 7825186 ~ 7825842 (+) True G17928
TU26754 lncRNA upstream 21699 7820310 ~ 7820640 (+) False slc27a1a
TU26730 lncRNA upstream 114155 7671703 ~ 7728184 (+) True G17912
TU26767 lncRNA downstream 613 7843581 ~ 7844217 (+) True G17936
TU26768 lncRNA downstream 2256 7845224 ~ 7846045 (+) True G17937
TU26817 lncRNA downstream 56943 7899911 ~ 7900147 (+) True G17973
TU26820 lncRNA downstream 72894 7915862 ~ 7923629 (+) True G17976
TU26837 lncRNA downstream 141512 7984480 ~ 8085629 (+) True G17990
XM_043234650.1 mRNA upstream 769 7838956 ~ 7841570 (+) True LOC122341274
XM_043232314.1 mRNA upstream 21261 7808243 ~ 7821078 (+) True slc27a1a
XM_043232334.1 mRNA upstream 34577 7801296 ~ 7807762 (+) False ptger1c
XM_043232326.1 mRNA upstream 34577 7804679 ~ 7807762 (+) True ptger1c
XM_043232298.1 mRNA upstream 45686 7786116 ~ 7796653 (+) True LOC122334406
XM_043234654.1 mRNA downstream 117109 7960077 ~ 7962976 (+) True LOC122341279
XM_043229244.1 mRNA downstream 131575 7974543 ~ 7977890 (+) True LOC122331730
XM_043234655.1 mRNA downstream 307775 8150743 ~ 8152894 (+) True LOC122341282
XM_043231970.1 mRNA downstream 312403 8155371 ~ 8166377 (+) True srebf2
XM_043231979.1 mRNA downstream 312403 8155371 ~ 8166377 (+) False srebf2
XR_006250506.1 other upstream 116820 7656032 ~ 7725519 (+) False baiap2a
TU26266 other upstream 1285589 6504915 ~ 6556750 (+) False G17590
TU26270 other upstream 1285589 6504915 ~ 6556750 (+) True G17590
TU26040 other upstream 1647317 6192740 ~ 6195022 (+) False LOC122341437
unassigned_transcript_276 other downstream 106793 7949761 ~ 7950417 (+) True LOC122331768
TU26829 other downstream 106836 7949804 ~ 7950310 (+) False LOC122331768
TU26831 other downstream 107886 7950854 ~ 7951364 (+) True G17985
TU26833 other downstream 117103 7960071 ~ 7962295 (+) False LOC122341279
TU26834 other downstream 121781 7964749 ~ 7966194 (+) True G17988

Expression Profile