RNA id: TU26831



Basic Information


Item Value
RNA id TU26831
length 376
RNA type TUCP
GC content 0.59
exon number 2
gene id G17985
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 7950854 ~ 7951364 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GATTTTTCTGCATCATTTGAAATGGCTGAcatttcattcttattttttcttctgatgTGCTTTGCTAGTGTTTATAGTCAAAGCCTGGAGTCCATCCCATCAAGTCCTGTCTCAAAAAAGCCTGGAGAAACTTTGAGTCTCTCTTGTAAAGGATCTGGATTTAATTTTGGACAGTACGGCATGCACTGGATCAGACAGCCAGCAGAGAAAGCACTGATCTGGATGGGGGTTATCTGGTATGATGCCAGTAAAACAGTGTATGCTAAAAGTGTAGAGGGACGAATAGAAATCACTAGAGATAATTCAAACAGCATGGTGTACCTGAAACTCTCTGGTCTGACAACAGAAGATACAGCTGTATATTACTGTGCAAGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU26820 lncRNA upstream 27225 7915862 ~ 7923629 (+) True G17976
TU26817 lncRNA upstream 50707 7899911 ~ 7900147 (+) True G17973
TU26768 lncRNA upstream 104809 7845224 ~ 7846045 (+) True G17937
TU26767 lncRNA upstream 106637 7843581 ~ 7844217 (+) True G17936
TU26765 lncRNA upstream 107886 7842339 ~ 7842968 (+) True G17934
TU26837 lncRNA downstream 33116 7984480 ~ 8085629 (+) True G17990
TU26839 lncRNA downstream 33116 7984480 ~ 8145025 (+) False G17990
TU26844 lncRNA downstream 37762 7989126 ~ 8092242 (+) True G17993
TU26845 lncRNA downstream 39735 7991099 ~ 8092242 (+) False G17993
TU26849 lncRNA downstream 39735 7991099 ~ 8091669 (+) False G17993
XM_043234650.1 mRNA upstream 109284 7838956 ~ 7841570 (+) True LOC122341274
XM_043232314.1 mRNA upstream 129776 7808243 ~ 7821078 (+) True slc27a1a
XM_043232334.1 mRNA upstream 143092 7801296 ~ 7807762 (+) False ptger1c
XM_043232326.1 mRNA upstream 143092 7804679 ~ 7807762 (+) True ptger1c
XM_043232298.1 mRNA upstream 154201 7786116 ~ 7796653 (+) True LOC122334406
XM_043234654.1 mRNA downstream 8713 7960077 ~ 7962976 (+) True LOC122341279
XM_043229244.1 mRNA downstream 23179 7974543 ~ 7977890 (+) True LOC122331730
XM_043234655.1 mRNA downstream 199379 8150743 ~ 8152894 (+) True LOC122341282
XM_043231970.1 mRNA downstream 204007 8155371 ~ 8166377 (+) True srebf2
XM_043231979.1 mRNA downstream 204007 8155371 ~ 8166377 (+) False srebf2
unassigned_transcript_276 other upstream 437 7949761 ~ 7950417 (+) True LOC122331768
TU26829 other upstream 544 7949804 ~ 7950310 (+) False LOC122331768
XR_006250506.1 other upstream 225335 7656032 ~ 7725519 (+) False baiap2a
TU26266 other upstream 1394104 6504915 ~ 6556750 (+) False G17590
TU26270 other upstream 1394104 6504915 ~ 6556750 (+) True G17590
TU26833 other downstream 8707 7960071 ~ 7962295 (+) False LOC122341279
TU26834 other downstream 13385 7964749 ~ 7966194 (+) True G17988
TU26879 other downstream 105295 8056659 ~ 8059857 (+) True G18008
TU26858 other downstream 199406 8150770 ~ 8152825 (+) False LOC122341282
TU26861 other downstream 199406 8150770 ~ 8152825 (+) False LOC122341282

Expression Profile