RNA id: TU27566



Basic Information


Item Value
RNA id TU27566
length 201
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G18457
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9574289 ~ 9574489 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AACATGTAAAACTACAACATAAAAGTCCACATTACAAAGCAAAAGCACAGTGCCCATAGCAGATGTTCTTACCTGCGGTTCTTTAGTGGGGTTCTTGAGCTGACACTGTTTCTCTAGATGCGTGATTAATTGGCTCTGGTTGCTCACTAGAGAAGTAAGTGCGTCATACTTCTTTTCCAGGTCTCTGTAACTGCTGGACAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU27565 lncRNA upstream 27 9573184 ~ 9574262 (+) True G18456
TU27563 lncRNA upstream 2555 9571154 ~ 9571734 (+) True G18454
TU27562 lncRNA upstream 4006 9570038 ~ 9570283 (+) True G18453
TU27551 lncRNA upstream 30923 9541700 ~ 9543366 (+) True G18443
TU27532 lncRNA upstream 89553 9484435 ~ 9484736 (+) True G18429
TU27569 lncRNA downstream 392 9574881 ~ 9575902 (+) True G18458
TU27567 lncRNA downstream 752 9575241 ~ 9575694 (+) False G18458
TU27568 lncRNA downstream 752 9575241 ~ 9575902 (+) False G18458
TU27582 lncRNA downstream 28153 9602642 ~ 9603064 (+) True G18470
TU27622 lncRNA downstream 200831 9775320 ~ 9784458 (+) True G18502
XM_043235676.1 mRNA upstream 87101 9428864 ~ 9487188 (+) False olfm2a
XM_043235675.1 mRNA upstream 87101 9462389 ~ 9487188 (+) True olfm2a
XM_043235655.1 mRNA upstream 173479 9353698 ~ 9400810 (+) True col5a3a
XM_043235656.1 mRNA upstream 173479 9353698 ~ 9400810 (+) False col5a3a
XM_043229938.1 mRNA upstream 306559 9260905 ~ 9267730 (+) True zmp:0000001048
XM_043235555.1 mRNA downstream 3236 9577725 ~ 9582385 (+) True ppan
XM_043235559.1 mRNA downstream 7885 9582374 ~ 9586218 (+) True p2ry11
XM_043235558.1 mRNA downstream 13521 9588010 ~ 9591291 (+) True eif3g
XM_043233746.1 mRNA downstream 82063 9656552 ~ 9666605 (+) True icam3
XM_043235722.1 mRNA downstream 93078 9667567 ~ 9672804 (+) True LOC122341977
TU27323 other upstream 388629 9184528 ~ 9185660 (+) False LOC122341719
TU27325 other upstream 388708 9184528 ~ 9185581 (+) False LOC122341719
TU26907 other upstream 1010913 8260084 ~ 8563376 (+) False LOC122342110
TU27599 other downstream 120143 9694632 ~ 9696559 (+) False aanat2
TU27611 other downstream 165307 9739796 ~ 9749880 (+) True G18491
TU27625 other downstream 224326 9798815 ~ 9799755 (+) True hbbe1.3
TU27725 other downstream 451329 10025818 ~ 10034467 (+) True G18574
TU28036 other downstream 1178270 10752759 ~ 10781853 (+) False kcna7

Expression Profile