RNA id: TU27568



Basic Information


Item Value
RNA id TU27568
length 662
lncRNA type inter_gene
GC content 0.51
exon number 1
gene id G18458
representative False

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9574881 ~ 9575902 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGTTGCATTAAACACCAAACCCTCGAGCCTCCGTTGCTCCAAAGCCTGATCCTTTTTCTGGATGATCTCATTCAGCAGTTGAGCGTAGAGTTGGGTGATGCGGGCGTTCATGTTGACGCTCTCCCTTCGCAGAACTCGCATCTCATTGGCCAGCGCGCCCTCCTGCTCCAGCTGCCCACGCATTGTGTCCAGCTGTTCCTGCTGGCGGTCCAGCAGCGCGCGCAGGGACGCCATCTCAGAGCGGTTGACACGAGCCGTCTCGGTGCTCACGCAAAGCGCCCCCGTTAACTTCTGCTGAGGTACGATGAAAGTGTAGGAACAGCGGCTCGGCTTGTTCTCTGTCGCTCGAGATGGCCTTTTCTGACCCGCATCACCCTTGGAGGTGTCTAAACCGCAGCCCCCATCAAAAACCAGCAGGAAGACCAAGGCACAAGTCACTGGAATTTCCATAAGTGTTGCAACTGAGccataagaaacaaaaaaatgcaaaatcttAGCATTTTACAGACTGCACGCAGACTGCGTGTGAATTAGCCACCAACTGGCATTAGATTGTGTTGTTCAGACTTGAACTGACTTGAAAAAGAAGTTAAAAAGTACTAAACCACTGTGACCACAAAATTTCGAAATTGGGATTTTTCATCGTCTTATTGCGAAAACCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU27566 lncRNA upstream 752 9574289 ~ 9574489 (+) True G18457
TU27565 lncRNA upstream 979 9573184 ~ 9574262 (+) True G18456
TU27563 lncRNA upstream 3507 9571154 ~ 9571734 (+) True G18454
TU27562 lncRNA upstream 4958 9570038 ~ 9570283 (+) True G18453
TU27551 lncRNA upstream 31875 9541700 ~ 9543366 (+) True G18443
TU27582 lncRNA downstream 26740 9602642 ~ 9603064 (+) True G18470
TU27622 lncRNA downstream 199418 9775320 ~ 9784458 (+) True G18502
TU27627 lncRNA downstream 278701 9854603 ~ 9859173 (+) True G18507
TU27641 lncRNA downstream 289884 9865786 ~ 9943153 (+) True G18517
TU27691 lncRNA downstream 335055 9910957 ~ 9911612 (+) True G18549
XM_043235676.1 mRNA upstream 88053 9428864 ~ 9487188 (+) False olfm2a
XM_043235675.1 mRNA upstream 88053 9462389 ~ 9487188 (+) True olfm2a
XM_043235655.1 mRNA upstream 174431 9353698 ~ 9400810 (+) True col5a3a
XM_043235656.1 mRNA upstream 174431 9353698 ~ 9400810 (+) False col5a3a
XM_043229938.1 mRNA upstream 307511 9260905 ~ 9267730 (+) True zmp:0000001048
XM_043235555.1 mRNA downstream 1823 9577725 ~ 9582385 (+) True ppan
XM_043235559.1 mRNA downstream 6472 9582374 ~ 9586218 (+) True p2ry11
XM_043235558.1 mRNA downstream 12108 9588010 ~ 9591291 (+) True eif3g
XM_043233746.1 mRNA downstream 80650 9656552 ~ 9666605 (+) True icam3
XM_043235722.1 mRNA downstream 91665 9667567 ~ 9672804 (+) True LOC122341977
TU27323 other upstream 389581 9184528 ~ 9185660 (+) False LOC122341719
TU27325 other upstream 389660 9184528 ~ 9185581 (+) False LOC122341719
TU26907 other upstream 1011865 8260084 ~ 8563376 (+) False LOC122342110
TU27599 other downstream 118730 9694632 ~ 9696559 (+) False aanat2
TU27611 other downstream 163894 9739796 ~ 9749880 (+) True G18491
TU27625 other downstream 222913 9798815 ~ 9799755 (+) True hbbe1.3
TU27725 other downstream 449916 10025818 ~ 10034467 (+) True G18574
TU28036 other downstream 1176857 10752759 ~ 10781853 (+) False kcna7

Expression Profile