RNA id: TU27582


Basic Information

Item Value
RNA id TU27582
length 311
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G18470
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 9602642 ~ 9603064 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

ACTCTAGAGAACATTGAAAGGATAGTTGGCTGTTTTCCAGAGTTACGCGTGACCCTGGTACTGGCTGGAGACTCTCTCACTCTTGGGCTCAGACTCTGCTTTACTGCGACGGCCGCCCCTTCCCTTGGGGGCGCTGGGAGACTTTATAGCATCTCCTTCCTCCTGAGTATCCATGGCTCCCTCCTTCTCGCCTTCGTGAGACCCATTTTCAGAGAAGCCGTTTGAATGTCCGTTCTGCTCCACGCCATCATCCTCTTTGACTACTCCCAGAGCTTTCTTCAGCACGGCCTTTACCTCCGACATGTAAACCT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU27569 lncRNA upstream 26740 9574881 ~ 9575902 (+) True G18458
TU27568 lncRNA upstream 26740 9575241 ~ 9575902 (+) False G18458
TU27567 lncRNA upstream 26948 9575241 ~ 9575694 (+) False G18458
TU27566 lncRNA upstream 28153 9574289 ~ 9574489 (+) True G18457
TU27565 lncRNA upstream 28380 9573184 ~ 9574262 (+) True G18456
TU27622 lncRNA downstream 172256 9775320 ~ 9784458 (+) True G18502
TU27627 lncRNA downstream 251539 9854603 ~ 9859173 (+) True G18507
TU27641 lncRNA downstream 262722 9865786 ~ 9943153 (+) True G18517
TU27691 lncRNA downstream 307893 9910957 ~ 9911612 (+) True G18549
TU27728 lncRNA downstream 431077 10034141 ~ 10103461 (+) False G18574
XM_043235558.1 mRNA upstream 11351 9588010 ~ 9591291 (+) True eif3g
XM_043235559.1 mRNA upstream 16424 9582374 ~ 9586218 (+) True p2ry11
XM_043235555.1 mRNA upstream 20257 9577725 ~ 9582385 (+) True ppan
XM_043235676.1 mRNA upstream 115454 9428864 ~ 9487188 (+) False olfm2a
XM_043235675.1 mRNA upstream 115454 9462389 ~ 9487188 (+) True olfm2a
XM_043233746.1 mRNA downstream 53488 9656552 ~ 9666605 (+) True icam3
XM_043235722.1 mRNA downstream 64503 9667567 ~ 9672804 (+) True LOC122341977
XM_043235157.1 mRNA downstream 76834 9679898 ~ 9692637 (+) True mgrn1b
XM_043235156.1 mRNA downstream 76834 9679898 ~ 9692637 (+) False mgrn1b
XM_043235155.1 mRNA downstream 76834 9679898 ~ 9689708 (+) False mgrn1b
TU27323 other upstream 416982 9184528 ~ 9185660 (+) False LOC122341719
TU27325 other upstream 417061 9184528 ~ 9185581 (+) False LOC122341719
TU26907 other upstream 1039266 8260084 ~ 8563376 (+) False LOC122342110
TU27599 other downstream 91568 9694632 ~ 9696559 (+) False aanat2
TU27611 other downstream 136732 9739796 ~ 9749880 (+) True G18491
TU27625 other downstream 195751 9798815 ~ 9799755 (+) True hbbe1.3
TU27725 other downstream 422754 10025818 ~ 10034467 (+) True G18574
TU28036 other downstream 1149695 10752759 ~ 10781853 (+) False kcna7

Expression Profile