Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU27754 |
| length | 206 |
| lncRNA type | intronic |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G18599 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 9571600 ~ 9571805 (-) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0051147 | regulation of muscle cell differentiation | biological_process |
| GO:0051149 | positive regulation of muscle cell differentiation | biological_process |
| GO:0051153 | regulation of striated muscle cell differentiation | biological_process |
| GO:0051155 | positive regulation of striated muscle cell differentiation | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0045597 | positive regulation of cell differentiation | biological_process |
| GO:0032502 | developmental process | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_006250528.1 | lncRNA | downstream | 37813 | 9512446 ~ 9533787 (-) | True | LOC122342127 |
| XR_006250529.1 | lncRNA | downstream | 37813 | 9532717 ~ 9533787 (-) | False | LOC122342127 |
| TU27547 | lncRNA | downstream | 86245 | 9481321 ~ 9485355 (-) | True | G18439 |
| TU27528 | lncRNA | downstream | 157593 | 9413404 ~ 9414007 (-) | True | G18426 |
| TU27489 | lncRNA | downstream | 371898 | 9198608 ~ 9199702 (-) | True | G18388 |
| TU27759 | lncRNA | upstream | 18116 | 9589921 ~ 9591291 (-) | True | G18602 |
| TU27766 | lncRNA | upstream | 74508 | 9646313 ~ 9646566 (-) | True | G18608 |
| TU27786 | lncRNA | upstream | 181430 | 9753235 ~ 9753522 (-) | True | G18623 |
| TU27798 | lncRNA | upstream | 213444 | 9785249 ~ 9786124 (-) | False | G18628 |
| TU27799 | lncRNA | upstream | 213444 | 9785249 ~ 9786124 (-) | False | G18628 |
| XM_043235552.1 | mRNA | downstream | 2273 | 9563751 ~ 9569327 (-) | True | icam5 |
| XM_043235554.1 | mRNA | downstream | 8218 | 9538376 ~ 9563382 (-) | True | trip10a |
| XM_043226026.1 | mRNA | downstream | 230597 | 9333096 ~ 9341003 (-) | True | rdh8a |
| XM_043229924.1 | mRNA | downstream | 276751 | 9265773 ~ 9294849 (-) | False | notch3 |
| XM_043229915.1 | mRNA | downstream | 276751 | 9265773 ~ 9294849 (-) | True | notch3 |
| XM_043235264.1 | mRNA | upstream | 20510 | 9592315 ~ 9605013 (-) | True | dnmt1 |
| XM_043235265.1 | mRNA | upstream | 20510 | 9592315 ~ 9605012 (-) | False | dnmt1 |
| XM_043235720.1 | mRNA | upstream | 35479 | 9607284 ~ 9629912 (-) | True | s1pr2 |
| XM_043235774.1 | mRNA | upstream | 103413 | 9675218 ~ 9678951 (-) | True | ubald1b |
| XM_043233973.1 | mRNA | upstream | 126259 | 9698064 ~ 9740156 (-) | False | rhbdf1a |
| TU27537 | other | downstream | 108695 | 9426572 ~ 9462905 (-) | True | G18433 |
| TU27085 | other | downstream | 1172772 | 8309552 ~ 8398828 (-) | True | fmc1 |
| TU27088 | other | downstream | 1260251 | 8309552 ~ 8311349 (-) | False | fmc1 |
| XR_006250544.1 | other | downstream | 1352545 | 8218902 ~ 8219055 (-) | True | LOC122342198 |
| TU27061 | other | downstream | 1362507 | 8207764 ~ 8209093 (-) | False | LOC122339740 |
| XR_006250486.1 | other | upstream | 822509 | 10394314 ~ 10396341 (-) | True | eef2kmt |
| XR_006250541.1 | other | upstream | 1207296 | 10779101 ~ 10779235 (-) | True | LOC122342195 |
| XR_006250542.1 | other | upstream | 1208297 | 10780102 ~ 10780196 (-) | True | LOC122342196 |
| XR_006248663.1 | other | upstream | 1440131 | 11011936 ~ 11064583 (-) | False | lrrc4ba |
| XR_006250462.1 | other | upstream | 2122467 | 11694272 ~ 11714719 (-) | False | map3k3 |
