RNA id: TU30352



Basic Information


Item Value
RNA id TU30352
length 316
lncRNA type inter_gene
GC content 0.41
exon number 1
gene id G20363
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 15366136 ~ 15366451 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


AGAATTCTATTATATTTAAGATACcaaatctgttgttttttacTGGTTCTTGCACAGCTGATTTATGCGAGCACTTTCTCTGGCACTGTAACAggtctatttttctttttaagaccTTTCAGAGAGGAGATTCAGCTTGATTTGAACGGAAAATGTAAAGGGCCTTCTTGTTTCTACCTCAGATTACGCACTCATCCAGGAGGCACTCAGATATTGCTCTCCTCCAAATGTTCTATCAGGTGTTCGTCACACTCGGCTCCTTCAGGCGCTCAAATGTGTCACGTCACTGCTATCTTCTGAATAGCAGCTGTACATT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU30323 lncRNA downstream 32650 15280347 ~ 15333486 (-) True G20338
TU30340 lncRNA downstream 41525 15319710 ~ 15324611 (-) True G20352
TU30330 lncRNA downstream 111519 15252095 ~ 15254617 (-) True G20344
TU30157 lncRNA downstream 376145 14988277 ~ 14989991 (-) True G20253
TU30158 lncRNA downstream 376145 14988277 ~ 14989991 (-) False G20253
TU30588 lncRNA upstream 268621 15635072 ~ 15637612 (-) True G20546
TU30614 lncRNA upstream 454768 15821219 ~ 15821945 (-) True G20571
TU30675 lncRNA upstream 838918 16205369 ~ 16207819 (-) True G20624
TU30682 lncRNA upstream 848149 16214600 ~ 16216244 (-) True G20630
TU30679 lncRNA upstream 851795 16218246 ~ 16219257 (-) True G20627
XM_043230622.1 mRNA downstream 24259 15338962 ~ 15341877 (-) True b9d1
XM_043235652.1 mRNA downstream 49575 15309745 ~ 15316561 (-) True grapa
XM_043235651.1 mRNA downstream 56529 15302248 ~ 15309607 (-) True fam83ga
XM_043231994.1 mRNA downstream 151454 15180602 ~ 15214682 (-) False arhgap23a
XM_043233980.1 mRNA upstream 95843 15462294 ~ 15491956 (-) False llgl1
XM_043233979.1 mRNA upstream 95843 15462294 ~ 15491956 (-) False llgl1
XM_043233982.1 mRNA upstream 95843 15462294 ~ 15491956 (-) True llgl1
XM_043233981.1 mRNA upstream 95843 15462294 ~ 15491955 (-) False llgl1
XM_043228918.1 mRNA upstream 127949 15494400 ~ 15523417 (-) True myo15aa
TU30272 other downstream 186908 15120806 ~ 15179228 (-) False plcd3a
TU30290 other downstream 220544 15142941 ~ 15145592 (-) False LOC122341947
TU30091 other downstream 926595 14435150 ~ 14439541 (-) False mlx
TU30582 other upstream 232327 15598778 ~ 15600286 (-) False atp5mf
TU30746 other upstream 1084689 16451140 ~ 16451800 (-) True G20680
TU30805 other upstream 1349309 16715760 ~ 16729665 (-) False mafk
TU30968 other upstream 1672739 17039190 ~ 17042336 (-) False snn
TU31152 other upstream 2297054 17663505 ~ 17691189 (-) True h3f3a

Expression Profile