RNA id: TU30746



Basic Information


Item Value
RNA id TU30746
length 661
RNA type TUCP
GC content 0.44
exon number 1
gene id G20680
representative True

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 16451140 ~ 16451800 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TAACTTGTGACATTGAGAAAATGTTCCACCAGTTCCATGTCCAAGAAAAGGATCGGGATTATCTGCGCTTTTTGTGGTGGAAAGATGGAGATGCAAATTCAGTACTTCAAGATTACCGAATGAAAGTGCATCTGTTTGGTGCAGTGTCTTCGCCCGGTTGCGCGAACTATGGACTAAGATACTTAGCCAATGACcacagccaaacacacacattaggtGCTCAGTTCATCATTAGAGATTTTTATGTCGATGATGGAGTTACAAGTGCAGAGACAGTAGAAGAGGCCATTCAGTTGACAAAGGAAGCACGGGAGCTGTGTGCAAAGGGTGGTCTTAGACTTCATAAGTTTGTATCAAACAACAACACTGTTTTGCAGAATATACCAGCATCAGAATGCGCTGTAAACTTTGAAACAAAAGATCTCACCTTCAATGACATGCCGCTTGAAAGAGCTTTGGGCATCCATTGGAACATACAGAGTGACAGCTTTAAATTTCATATACCACTAAAGGGTCAACCTACAACACGCCGTGGTATACTGTCTACTGTTGCGTCCATATATGATCCTTTGGGCTTTGTAGCTCCGTACGTTCTGAATGGCAAGAGGATTTTGCAAGAAATGTGTCGCCAAGGTACAGGCTGGGATGATCCGCTCTCCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU30697 lncRNA downstream 178616 16272279 ~ 16272524 (-) True G20645
TU30695 lncRNA downstream 181232 16269684 ~ 16269908 (-) True G20643
TU30679 lncRNA downstream 231883 16218246 ~ 16219257 (-) True G20627
TU30682 lncRNA downstream 234896 16214600 ~ 16216244 (-) True G20630
TU30675 lncRNA downstream 243321 16205369 ~ 16207819 (-) True G20624
TU30749 lncRNA upstream 3025 16454825 ~ 16455444 (-) False LOC122341847
TU30800 lncRNA upstream 239365 16691165 ~ 16699422 (-) True G20717
TU30801 lncRNA upstream 239365 16691165 ~ 16699422 (-) False G20717
TU30847 lncRNA upstream 331404 16783204 ~ 16783825 (-) True G20752
TU30848 lncRNA upstream 333190 16784990 ~ 16785208 (-) True G20753
XM_043235517.1 mRNA downstream 97 16449554 ~ 16451043 (-) True LOC122341848
XM_043235308.1 mRNA downstream 78701 16368873 ~ 16372439 (-) False nudt1
XM_043235307.1 mRNA downstream 78743 16368873 ~ 16372397 (-) True nudt1
XM_043233724.1 mRNA downstream 93608 16308421 ~ 16357532 (-) True ttyh3a
XM_043233725.1 mRNA downstream 93609 16308421 ~ 16357531 (-) False ttyh3a
XM_043235516.1 mRNA upstream 1274 16453074 ~ 16455479 (-) True LOC122341847
XM_043235922.1 mRNA upstream 90548 16542348 ~ 16629156 (-) False elfn1a
XM_043235919.1 mRNA upstream 90548 16542348 ~ 16629156 (-) False elfn1a
XM_043235920.1 mRNA upstream 90548 16542348 ~ 16628718 (-) False elfn1a
XM_043235921.1 mRNA upstream 90548 16542348 ~ 16578932 (-) True elfn1a
TU30582 other downstream 850854 15598778 ~ 15600286 (-) False atp5mf
TU30272 other downstream 1271912 15120806 ~ 15179228 (-) False plcd3a
TU30290 other downstream 1305548 15142941 ~ 15145592 (-) False LOC122341947
TU30091 other downstream 2011599 14435150 ~ 14439541 (-) False mlx
TU30805 other upstream 263960 16715760 ~ 16729665 (-) False mafk
TU30968 other upstream 587390 17039190 ~ 17042336 (-) False snn
TU31152 other upstream 1211705 17663505 ~ 17691189 (-) True h3f3a
TU31151 other upstream 1237579 17689379 ~ 17691189 (-) False h3f3a
XR_006250182.1 other upstream 1257994 17709794 ~ 17718609 (-) False LOC122340174

Expression Profile