RNA id: TU32181


Basic Information

Item Value
RNA id TU32181
length 280
RNA type TUCP
GC content 0.49
exon number 3
gene id eftud2
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 20185535 ~ 20195721 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGGCAAATCTTACCTTTTTAACATCATGGACACGCCAGGTCATGTGAACTTCTCTGATGAGGTGACATCAGCAGTCAGACTGTCTGACGGCATTGTGCTTTTTATCGATGCTGCCGAGGGGGTGATGCTAAACACTGAGCGGCTGATTAAGCATGCAGTGCAGGAGAAGTTGGCCATCACTATCTGTATTAATAAAGTGGATCGTCTGATCGTGGAGCTCAAGCTACCCCCTACTGATGCATACTACAAACTGCGCCACATCGTGGATGAGGTCAACGGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_006250526.1 lncRNA upstream 2002 20173694 ~ 20185526 (+) True LOC122342124
TU32179 lncRNA upstream 14526 20168636 ~ 20173002 (+) True G21652
XR_006250469.1 lncRNA upstream 26317 20160436 ~ 20161211 (+) True LOC122341550
TU32162 lncRNA upstream 26323 20160436 ~ 20161205 (+) False LOC122341550
TU32079 lncRNA upstream 121652 20064960 ~ 20065876 (+) False LOC122341338
TU32185 lncRNA downstream 41932 20230015 ~ 20314144 (+) False G21655
TU32184 lncRNA downstream 125212 20313295 ~ 20314144 (+) True G21655
TU32192 lncRNA downstream 151808 20339891 ~ 20345356 (+) True G21660
TU32193 lncRNA downstream 152989 20341072 ~ 20342296 (+) True G21661
TU32202 lncRNA downstream 205478 20393561 ~ 20393901 (+) True G21669
XM_043234692.1 mRNA upstream 27347 20148514 ~ 20160181 (+) True LOC122341342
XM_043234997.1 mRNA upstream 74030 20094851 ~ 20113498 (+) True LOC122341546
XM_043234691.1 mRNA upstream 105483 20077002 ~ 20082045 (+) True LOC122341340
XM_043234690.1 mRNA upstream 110527 20071944 ~ 20077001 (+) True LOC122341339
XM_043234689.1 mRNA upstream 118275 20064270 ~ 20069253 (+) True LOC122341338
XM_043225769.1 mRNA downstream 13193 20201276 ~ 20229670 (+) False gjc1
XM_043225734.1 mRNA downstream 14050 20202133 ~ 20229670 (+) True gjc1
XM_043225743.1 mRNA downstream 14050 20202133 ~ 20229670 (+) False gjc1
XM_043225728.1 mRNA downstream 14050 20202133 ~ 20229670 (+) False gjc1
XM_043225719.1 mRNA downstream 14050 20202133 ~ 20229670 (+) False gjc1
TU32173 other upstream 330 20185567 ~ 20187198 (+) False eftud2
TU32169 other upstream 79692 20106846 ~ 20107836 (+) False LOC122341546
TU32077 other upstream 119527 20064490 ~ 20068001 (+) False LOC122341338
TU32078 other upstream 119527 20066130 ~ 20068001 (+) False LOC122341338
TU31597 other upstream 784352 19399871 ~ 19403176 (+) False ypel3
unassigned_transcript_291 other downstream 126177 20314260 ~ 20314331 (+) True trnac-gca_3
TU32806 other downstream 1107619 21295702 ~ 21414286 (+) True G22087
XR_006248723.1 other downstream 1449660 21637743 ~ 21734127 (+) False crhr1
TU33098 other downstream 1787169 21975252 ~ 21976665 (+) True G22301
XR_006248300.1 other downstream 1788426 21976509 ~ 22025911 (+) False wnk4b

Expression Profile