RNA id: XM_043229374.1


Basic Information

Item Value
RNA id XM_043229374.1
length 5704
RNA type mRNA
GC content 0.46
exon number 19
gene id wnk4b
representative False

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 21976509 ~ 22025911 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTCTCACTTGTcaaatttagtcattttctAAGAacttcaaacaataaataccatattttttgattattgacATATTGACAGATTTTTGTAGCACCTCAGTTCAAGCAGCTCTCTTCCACAACTCAATTGTCAAACAAAATGGCAGATTTGCATTATGAAGGTACCTGAAAAGGTTCAAAGAGATGAAGCTGAAGCTCCTCCAGCGTTGGAGTCATCAGATCCTGAAGGGTCTACATTTTTTGCACACGCGAACACCTCCCATAATCCACCGAGACCTTAAATGTGACAACATCTTCATCACTGGCCCCACAGGATCTGTTAAGATTGGTGATTTGGGCCTAGCTACTCTCAAGAGTGCCTCATTTGCCAAGAGTGTCATTGGAACCCCAGAGTTTATGGCTCCAGAGATGTACGAGGAGAAATATGATGAAGCTGTTGATGTTTACGCCTTTGGCATGTGCATCCTGGAGATGACCACATCAGAGTACCCTTACTCAGAATGCCAAAACGCTGCACAGATCTACCGCAAAGTCACCAGTGGCATGAAGCCAGACAGTTTTTACAAAGTAAAAGTCCCTGAACTGAAAGAGATTATTGAGGGATGCATCCGGATGAACAAAGACGAAAGGTACACTATCCAGGACCTGTTAGAGCACACCTTTTTTCAGGAGAATAATGGTGTCCATGTTGAATTGGCTGAGGAGGATGACATGGTGAAGTCTGGCCTTAAACTCTGGCTTCGAATGGATGACACCAAGAAGCTTCATGGCAAGTATAAAGACAACAACGCCATTGAGTTCCTGTTTGAACTCTACAAGGACGTCCCAGAAGAGGTGGCTCAGGAGATGGTTGTTCTTGGCTTCGTCTGTGAGGCAGACTACAAACTCGTGGCCAAAGCCATCCGCGACCGTGTCACCGCCATCAAGCGCCAACGAGAGAAGCTCCGCCGACAGGCCGAAGAAGCACAGAGGCGGCGACAAGAAGAGGTGATTGAGGAGGAACCCGAACCTGTTATTGAATCCGAACCTTCAGTTTCTAACCCACCTGCTCCTAAGCCTCCAGTAGAGATGCCTGTTTCCACCCCTATTCAAGCTCCGCCCACCGTCACCGTGTCAGGCCCCATTTCCCAGCCTGCAAACGAATCTCTGGACTCAGGCTTCAACGCCAGCTTTGCCACAGAACCCGAGGAGCCAGATGCCGATCAGCGGCAGCATTTCAACATACGTCACTCCAGCTACTCATCTGCGACTTCTGACTGTGAGACGGATGGATATCTCAGCTCCTCTGGGCTTCAGGATCCTTCAGAAGCTCGAGTTCCTGTGGCAAACCATGCCTCCCCAACTCCACAACCAACCAGTGGAGCTCCTCACATGGAAACTCCACCCACTGAAGCTGTATCCACTGAAGCCCCTCCCACAGCTGCAGCAATCCCAGCTCTCCGTTTCCCATCGAGCATTGCTGTGTCCCAAAACACAGAGAGGACCCAGTCAGGAAGTGCCAGTGGTTTTTCCTCTCCTGTCGACAGCTACGCTTCTGATGTCACGTCTGGTTTGAGTGATGGAAACGAGGGCCTTTCCGAGAGAGGCGGGAAAGGTCAGAACAAACGCACAGGAACAAAGCTGCTCAGGAAGAGGGCTCGCTCACGGCTACGCATCACTGGGCTGTCAGATAAAGTGGATCGGGTTGTAGAGTGTCAGCTACAGACCCATAACAGCAAGATGGTGACATTTAAATTCGATCTGGATGGAGACAACCCAGAAGACATTGCTGCAGTGATGGTACATAATGAGTTTATCCTACCTGGGGAGAGAGAGGGATTCATCCACCGCATGAGGGACATCATCCGTCGAGCGGAGGCCCTGATGAGGAGAGAGCCTTTGGAGCCCCTTAGCCCCAGAGACACTGCTCGTCTGCCTTATCTGAGTGGAGTCGGCTCGCTGTCTGCCTCACAGCCCAATCTCCACACGCACGGCCTTGCTCGCACAAACTCTTCCTCCTCGTTACCAgATTATGCCGCTGCCAGTATAGGGCCAGTGACCCGGGGGTCCTCGCCAACACTGAGCGCCGACTTTTACGTTGATCCCGATGCCGTTCCGCCCGTCCGGCCCCTGCGTTCACAGTCCTTCCACACTACAGGTTCCTCTCAGACCTACCAGTCTTTTACACCCAACTATGCTCAGTACGCCCACCCCGACCCCCTGCCACATCTCCTGCCAAATCAACTCCCCAAACCACCTTACGCTCACAACTCCCATTTCCCCTACCCCTACCAAATTGATCACGCCTCCCTCAAGAGTCCCCTCAACCCAAGTCCGCTCACCCGTGTACCCAGCAACCCAAActtcttctcctcttcttcatcctcttcaGTTGTTTCACCGGTTCAGCAGTCCACAGAGATGCCAACTCAAGCTGAAACCAACAATCTGCCGCTTTCAGCTGCCCCTCCGCCTGGTCCGCAAGCTGCAGGCATGTGGCCACCACCTTCCCAGCAACCCCTTATTTCACTGGCCAGTGTTCTTTCCATGGCTATGAACTTTGCACAGTCCTTTATACCCCCTGGATCCATCCCTCAAGGTTTCCATCCACAAATGGCCCCTCAAGCAGGCTATGGCCCTATATATCCAGCTCAGCACAATGCTGATGCTCCATACTACCAGGCAGCACAGGGCGGACAGTATATGGATATGTATCAATATCCTGATGCTCATACGCAGGTTCCGGCACCAGTCCCTGAACCTCATGAAGGGGGCCAAAGAGCATCTCCACCAGTAGTCCCACATAGAGAGCTGAGAACATGTACGGCCCCTGAGATTAAACAGCCCATAAACCCAAATCCCACAAACCCAAGCTCTTCTCCAGGGTTTAGAAGTAGCCCACTGACAGAGAGCCAGTCTTATCCCATTGGGCAACTCCGAGAGCGGGCAGACAGTTCAGCATCAAGCTCCCACACCCCATCCAGCACAAGCTCACCAGCATCGTCTACATCCCCGAGCCCGCAAAACACTGTGTCCTCACCTGTACCAAGGTCCTCCCCGACTCTATCCATGTCTCTGGCAGTGTTAGAAACAAATACCATTGCAGCCAAATCTAGACTCTCACCTATATCTGAAGAGAAAAAGTCTATTGTCACAGTTGGAAGATTCCAAGTCAGTCCAAGCAAGGAGATCCCCATTCCAACTCCCAGCCCGACTTCCAGGCTGACGCCAACTCCCACCCCTACAGCTACGGCCACATCCATACCGACCCAAAACAGACCCCAAACCACACCCCCTACTCacaacagccaatcagacaGCAGCACAGACGTACAGGTGGAATCAGAAAGCAGTCACAGCTCTCTGAACGAATCCCCACCACTTATCCAACCACCTACTAAGGTTCTCTGCCGCCCAGACAGCGCCCCCTTGTGGACCGGAGAACCTAAAACACCAGAGAGAAAAGTTTTAGAACCGGACGAGGGACGAGGAGGTGAAGAAggggaggaggtggaggaggagacagAAAGGAGGCGGAGGAGGATAAGTGTAAGTTTGCTGGAAAGTTCAGCCGGGAGTCCTCAGTTCAATCTCAATCAGCCGTGGATGAGCTATACACGCAGCACGTCGTACGCTAGCAGCGACGAGACAGAGAGTGAAGACGAGGGAATGTATGAGGAGCTACAGGAACTCAGAGAGAGacATGTGCAAGAGGTTCAGGCTCTCCAGGCCTCTCAAAAACAAGAGATCGAGGAGCTCTACAAACGCATGGGTAAAGTGCCCCCTCCAGGAATTGTGTCTCCAGCAGCCATGTTGTCCAGTCGCCAGCGTCGTCTGTCTAAAAGCGGAGGGTACCCAAGCTCTCGCCGCAACAGCCTGCAGAGACTGGACATGCTGCCCCCTACAGGTATCATGCGTAAGAACTCGGTGAGCGGCAGCAGCAGCGGGTCACAAGAAAGGACCAGTAAAGGAGTGACCTTTGCCTCTGATTATACCAGAATTTGATTTCGTTTTCTGAGGAGCCCTTTGGCCTTCGTACCGCTCTCCTTATGGACTGAAGTGACACCATTGCTTCCTCCGATGTGTGTGAGCACATGTTTGTGATGTCAGgaaaggagtgtgtgtgtgtgtgtccttcacAGACTGTGATGTGAATATTTTTAACCAGTATACCTCTGTTCAGTATTCTAAGGATGATTTACGTACCTAGTGAGCTTTCTGAAGAGACAGACTTTATATATGAAACTTGTTTAGAGATGTTGATCTCAGCACGGCAGTATGGAGAAATGCCCACTCGTTTGCAGCTATAGCACCCCTAGTGGTTGAATGTATTAattgcaaatgtgttttcagtCATTAGGCAGCCCATGTGGTTGCTCTCTATAATTTTGTCGGTTATAGATCAACCAGTCAGTTGTTTTATTCTCACTCCCAGGCTGTCATAAATACCTGAAAGAATTGGTACTGTAAACAACTGTATTTTGTCTCttgcaaaaatgcaatgcaaaccAATACATTCAATCCTTATAAAGACTTTTAGGCCTCACTGTaggtttgcttttaaataaacagtatcaTGTACATATTTggcaaattgtaaaaatgtttattacagCGCATATGTGACCTTGTTGCtataatgtttttgtacaacatatttttctgactCACAGTATtgacattaattttatttcctttttcatGATGTAAATCAGATGCCTGAAATTGATCTAAATTTTAATGCAGATGTTTTGAGTATCCAAATTGTAAAAACTGTATAGCTAAACCCACTTAGGTTTCTTaggtgaaattattttaatatttaaatgagaatAATAAGCATGTTTAAATGCACTTGTCAGTCGAATCTCATTTAGATCATTTGCATTATGCTAAAGtgactgaataaatgaatttctGGAGGTAACAATCAATCCAAAGTATCTAAAACCATATTTTAGAGAACAAATAGGGACAATCACTTAAAGAAATCTGCCTTCAGTTCACTTCATGTCCATACTGCCATTCTCTGAattgtatatttgtaattatacatttacttATCATTTTAGTAGGTACTATTTAAGAATTTAGTTCCTTTCTATGTTACAAATTAGCATACGGTATGTTTTCAGCTTATGGCTGCCTAATGTTTCctttatttgaacttttctGTCTTAATACTTTCCCCTTTGTTATTTGTATCTTAGTTAATCGACTGTGAAATGAAGATGAACTCGTGTTTTCttaattaaaagaagaaaataacaaacaacTGACACGCCGCACTTTTCTTCAAGGCATTTGCCAATAGATGCCACAGACAATCTGTATATAAAGACAATAATGAATCGTGATGTGTGGAGTCTCCATTTATATGCTTCGGCCTATGCAGTGATGTtacatatgttatatatgaatatgtaaaaacaaacataaaaatattgacaACTGAGAAACTGTGAAGTTTGAACAATTGTTGCCTTAAAGTATCTGCATTTGATTAGACAGCAGGTGTGTTCTACTGCATAGTGAGAGaagatttatatatagatatatttagaTAAAGAGAAAAGTTGTATTATATTACGCTGAAAAGAATGCAGATGCCATGCAGATTGtgcctattgttttttttttgttttgtttttgttttttacaatttattcttGATTCCTGGATGAAACATGATTAttgcaaatgtacaaataaatgattcacaaaca

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU33101 lncRNA upstream 20793 21977618 ~ 21979015 (+) False wnk4b
TU32959 lncRNA upstream 265386 21734138 ~ 21734422 (+) True G22201
TU32956 lncRNA upstream 363238 21636123 ~ 21636570 (+) True G22198
TU32955 lncRNA upstream 363729 21635744 ~ 21636079 (+) True G22197
TU32816 lncRNA upstream 506310 21345129 ~ 21493498 (+) True G22094
XR_006250495.1 lncRNA downstream 9971 22035882 ~ 22089931 (+) True LOC122341843
TU33104 lncRNA downstream 10006 22035917 ~ 22089931 (+) False LOC122341843
TU33106 lncRNA downstream 10006 22035917 ~ 22064100 (+) False LOC122341843
TU33114 lncRNA downstream 243266 22269177 ~ 22287045 (+) False hdac5
TU33113 lncRNA downstream 262230 22288141 ~ 22336221 (+) False hdac5
XM_043229386.1 mRNA upstream 23442 21975235 ~ 21976366 (+) True LOC122331845
XM_043234000.1 mRNA upstream 25107 21951307 ~ 21974701 (+) False arhgap27l
XM_043233878.1 mRNA downstream 98979 22124890 ~ 22256992 (+) True tanc2a
XM_043233880.1 mRNA downstream 98979 22124890 ~ 22256992 (+) False tanc2a
XM_043233876.1 mRNA downstream 98979 22124890 ~ 22256992 (+) False tanc2a
XM_043233881.1 mRNA downstream 98979 22124890 ~ 22256992 (+) False tanc2a
XM_043233879.1 mRNA downstream 172375 22198286 ~ 22256992 (+) False tanc2a
TU33098 other upstream 23143 21975252 ~ 21976665 (+) True G22301
XR_006248723.1 other upstream 265681 21637743 ~ 21734127 (+) False crhr1
TU32806 other upstream 585522 21295702 ~ 21414286 (+) True G22087
unassigned_transcript_291 other upstream 1685477 20314260 ~ 20314331 (+) True trnac-gca_3
TU32181 other upstream 1811725 20187528 ~ 20188083 (+) False eftud2
TU33161 other downstream 503078 22528989 ~ 22530060 (+) True G22344
TU33136 other downstream 520247 22546158 ~ 22547208 (+) True G22329
TU33451 other downstream 879466 22905377 ~ 22906695 (+) False LOC122341356
TU33550 other downstream 1132338 23158249 ~ 23163716 (+) False prr15la
XR_006250499.1 other downstream 1377530 23403441 ~ 23408814 (+) True LOC122341907

Expression Profile