Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU33104 |
| length | 481 |
| lncRNA type | inter_gene |
| GC content | 0.51 |
| exon number | 3 |
| gene id | LOC122341843 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 22035882 ~ 22089931 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU33101 | lncRNA | upstream | 56902 | 21977618 ~ 21979015 (+) | False | wnk4b |
| TU32959 | lncRNA | upstream | 301495 | 21734138 ~ 21734422 (+) | True | G22201 |
| TU32956 | lncRNA | upstream | 399347 | 21636123 ~ 21636570 (+) | True | G22198 |
| TU32955 | lncRNA | upstream | 399838 | 21635744 ~ 21636079 (+) | True | G22197 |
| TU32803 | lncRNA | upstream | 652793 | 21381808 ~ 21383124 (+) | True | G22084 |
| TU33114 | lncRNA | downstream | 179246 | 22269177 ~ 22287045 (+) | False | hdac5 |
| TU33113 | lncRNA | downstream | 198210 | 22288141 ~ 22336221 (+) | False | hdac5 |
| TU33157 | lncRNA | downstream | 421497 | 22511428 ~ 22640362 (+) | True | G22340 |
| TU33156 | lncRNA | downstream | 508087 | 22598018 ~ 22672911 (+) | False | G22340 |
| TU33382 | lncRNA | downstream | 634113 | 22724044 ~ 22725888 (+) | False | hoxb5a |
| XM_043229362.1 | mRNA | upstream | 10006 | 21976509 ~ 22025911 (+) | True | wnk4b |
| XM_043229374.1 | mRNA | upstream | 10006 | 21999808 ~ 22025911 (+) | False | wnk4b |
| XM_043229386.1 | mRNA | upstream | 59551 | 21975235 ~ 21976366 (+) | True | LOC122331845 |
| XM_043234001.1 | mRNA | upstream | 61216 | 21951309 ~ 21974701 (+) | False | arhgap27l |
| XM_043233878.1 | mRNA | downstream | 34959 | 22124890 ~ 22256992 (+) | True | tanc2a |
| XM_043233880.1 | mRNA | downstream | 34959 | 22124890 ~ 22256992 (+) | False | tanc2a |
| XM_043233876.1 | mRNA | downstream | 34959 | 22124890 ~ 22256992 (+) | False | tanc2a |
| XM_043233881.1 | mRNA | downstream | 34959 | 22124890 ~ 22256992 (+) | False | tanc2a |
| XM_043233879.1 | mRNA | downstream | 108355 | 22198286 ~ 22256992 (+) | False | tanc2a |
| XR_006248300.1 | other | upstream | 10006 | 21976509 ~ 22025911 (+) | False | wnk4b |
| TU33098 | other | upstream | 59252 | 21975252 ~ 21976665 (+) | True | G22301 |
| XR_006248723.1 | other | upstream | 301790 | 21637743 ~ 21734127 (+) | False | crhr1 |
| TU32806 | other | upstream | 621631 | 21295702 ~ 21414286 (+) | True | G22087 |
| unassigned_transcript_291 | other | upstream | 1721586 | 20314260 ~ 20314331 (+) | True | trnac-gca_3 |
| TU33161 | other | downstream | 439058 | 22528989 ~ 22530060 (+) | True | G22344 |
| TU33136 | other | downstream | 456227 | 22546158 ~ 22547208 (+) | True | G22329 |
| TU33451 | other | downstream | 815446 | 22905377 ~ 22906695 (+) | False | LOC122341356 |
| TU33550 | other | downstream | 1068318 | 23158249 ~ 23163716 (+) | False | prr15la |
| XR_006250499.1 | other | downstream | 1313510 | 23403441 ~ 23408814 (+) | True | LOC122341907 |
