RNA id: TU34152


Basic Information

Item Value
RNA id TU34152
length 316
lncRNA type inter_gene
GC content 0.22
exon number 1
gene id G23005
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24562812 ~ 24563127 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

aatacatttaatatgtaaactgcatatttttctgaaaatatatatatatatatatatatgcatgcagcgtatttatatatacacacagcacacatacacatataaacaaaaaatgtttgaaaattaatcgtttgaaagtaataattattaacttaATAATCTGACTTGaattaaactatttattattaattgcaaaGTTTGATTGGTTCCCCTTTCAAGTTCATGTAAAACTGATCAAGTTTGTGCTTGCTTGTTTAATTTCTGATCCAAAAATAGTacactaaaatatttctttcttaattttaaatgaaaaaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34149 lncRNA upstream 4551 24557711 ~ 24558261 (+) True G23002
TU34101 lncRNA upstream 45814 24133726 ~ 24516998 (+) True G22968
TU34132 lncRNA upstream 112942 24268426 ~ 24449870 (+) True G22988
TU34142 lncRNA upstream 125796 24434055 ~ 24437016 (+) False G22996
TU34134 lncRNA upstream 223158 24338871 ~ 24339654 (+) True G22990
TU34151 lncRNA downstream 119 24563246 ~ 24563895 (+) True G23004
TU34158 lncRNA downstream 49399 24612526 ~ 24612751 (+) True G23011
TU34166 lncRNA downstream 52040 24615167 ~ 24638416 (+) True G23014
TU34169 lncRNA downstream 52040 24615167 ~ 24638416 (+) False G23014
TU34167 lncRNA downstream 71030 24634157 ~ 24673712 (+) False G23014
XM_043229063.1 mRNA upstream 223 24558746 ~ 24562589 (+) True si:dkeyp-69e1.8
XM_043235408.1 mRNA upstream 5700 24549227 ~ 24557112 (+) False hmgxb4a
XM_043235409.1 mRNA upstream 5700 24549637 ~ 24557112 (+) True hmgxb4a
XM_043235410.1 mRNA upstream 5700 24550762 ~ 24557112 (+) False hmgxb4a
XM_043235411.1 mRNA upstream 5700 24550851 ~ 24557112 (+) False hmgxb4a
XM_043235192.1 mRNA downstream 51472 24614599 ~ 24618241 (+) True s1pr5a
XM_043235817.1 mRNA downstream 204502 24767629 ~ 24769271 (+) True LOC122342023
XM_043235813.1 mRNA downstream 208164 24771291 ~ 24781610 (+) True il12rb2l
XM_043235820.1 mRNA downstream 252746 24815873 ~ 24828439 (+) True LOC122342030
XM_043235818.1 mRNA downstream 268298 24831425 ~ 24833956 (+) True LOC122342024
TU34113 other upstream 32249 24529541 ~ 24530563 (+) False mcm5
TU34053 other upstream 113523 24446878 ~ 24449289 (+) True G22953
TU34141 other upstream 123349 24434055 ~ 24439463 (+) True G22996
TU34076 other upstream 465653 24095024 ~ 24097159 (+) True G22958
TU34052 other upstream 510949 24050738 ~ 24051863 (+) False LOC122342055
TU34183 other downstream 158399 24721526 ~ 24809963 (+) False G23026
TU34186 other downstream 158399 24721526 ~ 24811577 (+) False G23026
TU34203 other downstream 420222 24983349 ~ 24985917 (+) False LOC122342019
TU34266 other downstream 848791 25411918 ~ 25447270 (+) False G23061
TU34263 other downstream 882172 25445299 ~ 25447270 (+) False G23061

Expression Profile