RNA id: TU34158


Basic Information

Item Value
RNA id TU34158
length 226
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G23011
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24612526 ~ 24612751 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GGTAGAGAGCTGAATGGCCCATTGAGCTCCACGACAATGCTTGAGTGATGAATAAAGACAAtagaaaacacaacaaacaagaTTACATATGTAGTTTACCTATACTGTAGCAGTTtcaccttttacacacacacacacaattggtGTAGACACAATGTTCACTCAGCTATTATACTCATTAACTGCCAGTTCAACTAGCAATATCTAACACATTGCATTAAAGatt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU34151 lncRNA upstream 48631 24563246 ~ 24563895 (+) True G23004
TU34152 lncRNA upstream 49399 24562812 ~ 24563127 (+) True G23005
TU34149 lncRNA upstream 54265 24557711 ~ 24558261 (+) True G23002
TU34132 lncRNA upstream 162656 24268426 ~ 24449870 (+) True G22988
TU34166 lncRNA downstream 2416 24615167 ~ 24638416 (+) True G23014
TU34169 lncRNA downstream 2416 24615167 ~ 24638416 (+) False G23014
TU34167 lncRNA downstream 21406 24634157 ~ 24673712 (+) False G23014
TU34160 lncRNA downstream 27829 24640580 ~ 24650704 (+) True G23013
TU34161 lncRNA downstream 27829 24640580 ~ 24650704 (+) False G23013
XM_043229063.1 mRNA upstream 49937 24558746 ~ 24562589 (+) True si:dkeyp-69e1.8
XM_043235408.1 mRNA upstream 55414 24549227 ~ 24557112 (+) False hmgxb4a
XM_043235192.1 mRNA downstream 1848 24614599 ~ 24618241 (+) True s1pr5a
XM_043235817.1 mRNA downstream 154878 24767629 ~ 24769271 (+) True LOC122342023
XM_043235813.1 mRNA downstream 158540 24771291 ~ 24781610 (+) True il12rb2l
XM_043235820.1 mRNA downstream 203122 24815873 ~ 24828439 (+) True LOC122342030
XM_043235818.1 mRNA downstream 218674 24831425 ~ 24833956 (+) True LOC122342024
TU34113 other upstream 81963 24529541 ~ 24530563 (+) False mcm5
TU34053 other upstream 163237 24446878 ~ 24449289 (+) True G22953
TU34141 other upstream 173063 24434055 ~ 24439463 (+) True G22996
TU34076 other upstream 515367 24095024 ~ 24097159 (+) True G22958
TU34052 other upstream 560663 24050738 ~ 24051863 (+) False LOC122342055
TU34183 other downstream 108775 24721526 ~ 24809963 (+) False G23026
TU34186 other downstream 108775 24721526 ~ 24811577 (+) False G23026
TU34203 other downstream 370598 24983349 ~ 24985917 (+) False LOC122342019
TU34266 other downstream 799167 25411918 ~ 25447270 (+) False G23061
TU34263 other downstream 832548 25445299 ~ 25447270 (+) False G23061

Expression Profile