RNA id: TU34167



Basic Information


Item Value
RNA id TU34167
length 879
lncRNA type inter_gene
GC content 0.27
exon number 2
gene id G23014
representative False

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24615167 ~ 24673712 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


ccAAGTGAAATCTTCAAATAGTTTATTTCAAGTTAGATTTACACACAGGTCAAGAACGCTCATGAATTAATTCTCAGAAAATGCATCACTAGATCAATTAACCAACCAGAATGTACAGAAAttagtaaaaaattatatatgtgtgtactttgtatattatgtatagttattatgtatattattgtatatttattacatataaatatacccacaaacaatatatatttgtaaaacatgtacatgtatatttatattcatatatgtttaatataaacaattaattaatgtatttatatatacataaatatacacattgcacacacataaattagtacacaaaaacttttatttttgacgCGAATAATCGCAATTCATTGATTGGCAGCACTAacagaaacaattttttttactgtacatagcaaaaaataaaagaaaaaaagacaattatcAGCCAAAGATCTAgattcatgaaaataaatacaactctTCTTTATATACAATACTgcataattaaaacacaaacgctatgtatatgcaaatgcaataataaacatatttacatacactATTTACACATTCACAGTGAGAATGTAAAACAGATGTCACACAAGCTTGACTACAAAAcgtttgtaataaaaatgaaagacattCTCTGACTCCCTGAATAGCATCTGGTATGAATCATCCACATTTTCACTGaagtaaaatcattaaaaaaaaaaaatcactggaaTCATTGGCTCATATAACGAGGAACTTTATAATAGCAAAAAAAGTAACTTCAGTATCAGTACTGCATATGAGAAAGCAACCAGGTGCTGTTGGACAAAGTCTTTTTTCCATGAACTTCCGTTATCAGAAGTaaaaaaagtaaaaaaa

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU34158 lncRNA upstream 21406 24612526 ~ 24612751 (+) True G23011
TU34151 lncRNA upstream 70262 24563246 ~ 24563895 (+) True G23004
TU34152 lncRNA upstream 71030 24562812 ~ 24563127 (+) True G23005
TU34149 lncRNA upstream 75896 24557711 ~ 24558261 (+) True G23002
TU34142 lncRNA upstream 197141 24434055 ~ 24437016 (+) False G22996
TU34188 lncRNA downstream 47814 24721526 ~ 24809963 (+) False G23026
TU34190 lncRNA downstream 56647 24730359 ~ 25090434 (+) True G23027
TU34184 lncRNA downstream 80826 24754538 ~ 24809963 (+) True G23026
TU34210 lncRNA downstream 283599 24957311 ~ 25267157 (+) True G23031
TU34230 lncRNA downstream 405980 25079692 ~ 25087970 (+) True G23044
XM_043235192.1 mRNA upstream 15916 24614599 ~ 24618241 (+) True s1pr5a
XM_043229063.1 mRNA upstream 71568 24558746 ~ 24562589 (+) True si:dkeyp-69e1.8
XM_043235408.1 mRNA upstream 77045 24549227 ~ 24557112 (+) False hmgxb4a
XM_043235817.1 mRNA downstream 93917 24767629 ~ 24769271 (+) True LOC122342023
XM_043235813.1 mRNA downstream 97579 24771291 ~ 24781610 (+) True il12rb2l
XM_043235820.1 mRNA downstream 142161 24815873 ~ 24828439 (+) True LOC122342030
XM_043235818.1 mRNA downstream 157713 24831425 ~ 24833956 (+) True LOC122342024
XM_043234713.1 mRNA downstream 178669 24852381 ~ 24855237 (+) True LOC122341374
TU34113 other upstream 103594 24529541 ~ 24530563 (+) False mcm5
TU34053 other upstream 184868 24446878 ~ 24449289 (+) True G22953
TU34141 other upstream 194694 24434055 ~ 24439463 (+) True G22996
TU34076 other upstream 536998 24095024 ~ 24097159 (+) True G22958
TU34052 other upstream 582294 24050738 ~ 24051863 (+) False LOC122342055
TU34183 other downstream 47814 24721526 ~ 24809963 (+) False G23026
TU34186 other downstream 47814 24721526 ~ 24811577 (+) False G23026
TU34203 other downstream 309637 24983349 ~ 24985917 (+) False LOC122342019
TU34266 other downstream 738206 25411918 ~ 25447270 (+) False G23061
TU34263 other downstream 771587 25445299 ~ 25447270 (+) False G23061

Expression Profile