RNA id: TU34183



Basic Information


Item Value
RNA id TU34183
length 627
RNA type TUCP
GC content 0.57
exon number 4
gene id G23026
representative False

Chromosome Information


Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 24721526 ~ 24811577 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


tcaacaacaacaaccccgATTCATTGACAAAAGCGTATTAAATCAAAGTACCACTGGAAAAGTCACTCGGAATAAGAGTCCAATGGCAACCCCAGCGTATGTGAGGGAGCTGCAGCAGACCTCCCAGCCTCAGGGAGGCGGTGTGACTCCCACATCAGGCCAGGCTGCCACCGTGACGGCGGCTCCCCAACAATTCCTTGCTGAACTTCAGACTACAGGAGCGACGCCCTCAGCGGCCCCGCCCTCCGGCCAGACCACACCCCCTCCCTCGCAAGCACAGAAGAGCCAGGCGATCGCCCAGGCGCCGCCCGCACAAGCCCCGCCCACTCAGACTCAATATGTCACAGCTGAGATTCAGAGCTCACCTACGCAGTCCAGCAGTCAGAACACACCGCAGTACATCGTTGTCACAGTTACAGAGGGTTCTCTTCATTCCAGTGACTCTGTGTCAGATTCTAGTCCTCCTGCTGCCGTAGTCCAGACTGGAGTTCCTACACAGGTGGTGCAGCAGGTGCAGAGCGCCCAACAGAGGTCAGTAGTTCAAGCCACATCTCAGACAACAAAAACAGAGCCGGGCACCCAGCTGAATGTCACCAGCCTACAATCGGTGCACCTGACACAAGAGGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU34167 lncRNA upstream 47814 24634157 ~ 24673712 (+) False G23014
TU34160 lncRNA upstream 70822 24640580 ~ 24650704 (+) True G23013
TU34161 lncRNA upstream 70822 24640580 ~ 24650704 (+) False G23013
TU34166 lncRNA upstream 83110 24615167 ~ 24638416 (+) True G23014
TU34169 lncRNA upstream 83110 24615167 ~ 24638416 (+) False G23014
TU34210 lncRNA downstream 147348 24957311 ~ 25267157 (+) True G23031
TU34230 lncRNA downstream 269729 25079692 ~ 25087970 (+) True G23044
TU34290 lncRNA downstream 558314 25368277 ~ 25374497 (+) False arhgap17b
TU34295 lncRNA downstream 569265 25379228 ~ 25382913 (+) True G23077
TU34296 lncRNA downstream 582555 25392518 ~ 25394254 (+) True G23078
XM_043235192.1 mRNA upstream 103285 24614599 ~ 24618241 (+) True s1pr5a
XM_043229063.1 mRNA upstream 158937 24558746 ~ 24562589 (+) True si:dkeyp-69e1.8
XM_043235408.1 mRNA upstream 164414 24549227 ~ 24557112 (+) False hmgxb4a
XM_043235409.1 mRNA upstream 164414 24549637 ~ 24557112 (+) True hmgxb4a
XM_043235410.1 mRNA upstream 164414 24550762 ~ 24557112 (+) False hmgxb4a
XM_043235820.1 mRNA downstream 5910 24815873 ~ 24828439 (+) True LOC122342030
XM_043235818.1 mRNA downstream 21462 24831425 ~ 24833956 (+) True LOC122342024
XM_043234713.1 mRNA downstream 42418 24852381 ~ 24855237 (+) True LOC122341374
XM_043235812.1 mRNA downstream 173318 24983281 ~ 24993218 (+) True LOC122342019
XM_043235808.1 mRNA downstream 184292 24994255 ~ 25009566 (+) True LOC122342014
TU34113 other upstream 190963 24529541 ~ 24530563 (+) False mcm5
TU34053 other upstream 272237 24446878 ~ 24449289 (+) True G22953
TU34141 other upstream 282063 24434055 ~ 24439463 (+) True G22996
TU34076 other upstream 624367 24095024 ~ 24097159 (+) True G22958
TU34051 other upstream 669663 24050239 ~ 24051863 (+) False LOC122342055
TU34203 other downstream 173386 24983349 ~ 24985917 (+) False LOC122342019
TU34266 other downstream 601955 25411918 ~ 25447270 (+) False G23061
TU34263 other downstream 635336 25445299 ~ 25447270 (+) False G23061
TU34364 other downstream 766013 25575976 ~ 25577043 (+) False LOC122331665
XR_006249348.1 other downstream 803273 25613236 ~ 25615293 (+) False LOC122336634

Expression Profile