Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_043235398.1 |
| length | 921 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 5 |
| gene id | LOC122341783 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_056701.1 |
| NCBI id | CM032070.1 |
| chromosome length | 30200998 |
| location | 25832505 ~ 25834198 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| species | tiger barb (Puntius tetrazona) |
| id | name | namespace |
|---|---|---|
| GO:0007264 | small GTPase mediated signal transduction | biological_process |
| GO:0005622 | intracellular anatomical structure | cellular_component |
| GO:0005525 | GTP binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU34465 | lncRNA | upstream | 2061 | 25828964 ~ 25830444 (+) | True | G23149 |
| TU34439 | lncRNA | upstream | 45482 | 25779416 ~ 25787023 (+) | True | G23142 |
| TU34435 | lncRNA | upstream | 57358 | 25769381 ~ 25775147 (+) | True | G23139 |
| TU34412 | lncRNA | upstream | 65455 | 25631139 ~ 25767050 (+) | True | G23125 |
| TU34419 | lncRNA | upstream | 104801 | 25634624 ~ 25727704 (+) | True | G23127 |
| TU34469 | lncRNA | downstream | 185 | 25834383 ~ 25835141 (+) | True | G23151 |
| TU34456 | lncRNA | downstream | 2945 | 25837143 ~ 25840677 (+) | False | G23146 |
| TU34470 | lncRNA | downstream | 12911 | 25847109 ~ 25853243 (+) | True | G23152 |
| TU34453 | lncRNA | downstream | 15703 | 25849901 ~ 25850576 (+) | False | G23146 |
| TU34489 | lncRNA | downstream | 40116 | 25874314 ~ 25877151 (+) | True | G23160 |
| XM_043235543.1 | mRNA | upstream | 109759 | 25720847 ~ 25722746 (+) | True | LOC122341871 |
| XM_043233716.1 | mRNA | upstream | 133400 | 25696871 ~ 25699105 (+) | True | LOC122336602 |
| XM_043233721.1 | mRNA | upstream | 201872 | 25628899 ~ 25630633 (+) | True | LOC122336676 |
| XM_043233719.1 | mRNA | upstream | 216877 | 25613159 ~ 25615628 (+) | False | LOC122336634 |
| XM_043233718.1 | mRNA | upstream | 220814 | 25609480 ~ 25611691 (+) | True | LOC122336618 |
| XM_043230335.1 | mRNA | downstream | 2988 | 25837186 ~ 25838307 (+) | True | LOC122332877 |
| XM_043230326.1 | mRNA | downstream | 2989 | 25837187 ~ 25840601 (+) | False | LOC122332877 |
| XM_043235415.1 | mRNA | downstream | 10489 | 25844687 ~ 25845748 (+) | True | LOC122341789 |
| XM_043235956.1 | mRNA | downstream | 15360 | 25849558 ~ 25850619 (+) | True | LOC122342152 |
| XM_043235905.1 | mRNA | downstream | 22675 | 25856873 ~ 25871422 (+) | True | LOC122342114 |
| unassigned_transcript_296 | other | upstream | 125358 | 25706651 ~ 25707147 (+) | True | LOC122341380 |
| unassigned_transcript_295 | other | upstream | 126287 | 25704655 ~ 25706218 (+) | True | LOC122341888 |
| TU34365 | other | upstream | 170188 | 25661048 ~ 25662317 (+) | True | G23121 |
| TU34366 | other | upstream | 170188 | 25661048 ~ 25662317 (+) | False | G23121 |
| XR_006249347.1 | other | upstream | 217212 | 25613274 ~ 25615293 (+) | False | LOC122336634 |
| TU34447 | other | downstream | 2945 | 25837143 ~ 25840600 (+) | False | G23146 |
| TU34449 | other | downstream | 2945 | 25837143 ~ 25850576 (+) | False | G23146 |
| TU34450 | other | downstream | 2945 | 25837143 ~ 25850576 (+) | False | G23146 |
| TU34451 | other | downstream | 2945 | 25837143 ~ 25840600 (+) | False | G23146 |
| TU34462 | other | downstream | 2945 | 25837143 ~ 25850576 (+) | False | G23146 |
