RNA id: TU35237


Basic Information

Item Value
RNA id TU35237
length 216
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G23659
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 26722812 ~ 26723027 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTAATTGCAGACCTATGTGTGCATATGAGTACAGTCATTTTAGACATCTCCAAAACTGTTGCAAACTGatgaaaatactatttttaaatatacatatatttaagtCTTTGTTGCCGCAGTTTTGAAAGTGCCGCCTTCTGTTCTAAAGAAGGGGGTGCGCCAATACCTTTGTccatacagacgtggacaaaattgttggtaccctttggtcaatga

Function

GO: NA

KEGG:

id description
ko00330 Arginine and proline metabolism

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35137 lncRNA upstream 76360 26645271 ~ 26646452 (+) True G23594
TU35088 lncRNA upstream 224845 26492946 ~ 26497967 (+) True G23552
TU35079 lncRNA upstream 286964 26428219 ~ 26435848 (+) True G23550
TU35028 lncRNA upstream 530970 26179232 ~ 26191842 (+) False G23508
TU35027 lncRNA upstream 532887 26179232 ~ 26189925 (+) True G23508
TU35242 lncRNA downstream 5781 26728808 ~ 26729365 (+) True G23664
TU35302 lncRNA downstream 75784 26798811 ~ 26801395 (+) True srsf2b
TU35307 lncRNA downstream 102081 26825108 ~ 26834654 (+) False G23692
TU35309 lncRNA downstream 102081 26825108 ~ 26834795 (+) True G23692
XR_006250497.1 lncRNA downstream 106859 26829886 ~ 26834669 (+) True LOC122341893
XM_043229023.1 mRNA upstream 346 26718254 ~ 26722466 (+) True anks4b
XM_043234905.1 mRNA upstream 11994 26706800 ~ 26710818 (+) True dxo
XM_043235369.1 mRNA upstream 17081 26650829 ~ 26705731 (+) True pitpnc1a
XM_043235368.1 mRNA upstream 17081 26661253 ~ 26705731 (+) False pitpnc1a
XM_043231005.1 mRNA upstream 116234 26596279 ~ 26606578 (+) True cacng1b
XM_043231857.1 mRNA downstream 36036 26759063 ~ 26772903 (+) True ubald2
XM_043231958.1 mRNA downstream 75404 26798431 ~ 26801401 (+) False srsf2b
XM_043231934.1 mRNA downstream 81625 26804652 ~ 26812016 (+) True jmjd6
XM_043235572.1 mRNA downstream 89950 26812977 ~ 26835760 (+) True si:ch73-366l1.5
XM_043226013.1 mRNA downstream 126949 26849976 ~ 26856930 (+) True st6galnac2
XR_006250491.1 other upstream 18360 26661240 ~ 26704452 (+) False pitpnc1a
TU34502 other upstream 813636 25907165 ~ 25909176 (+) False LOC122341383
TU34498 other upstream 816477 25894657 ~ 25906335 (+) False LOC122341383
TU34460 other upstream 872236 25839626 ~ 25850576 (+) False G23146
TU35285 other downstream 36067 26759094 ~ 26772903 (+) False ubald2
TU35297 other downstream 75784 26798811 ~ 26801395 (+) False srsf2b
TU35298 other downstream 75784 26798811 ~ 26801395 (+) False srsf2b
TU35299 other downstream 75784 26798811 ~ 26801395 (+) False srsf2b
TU35300 other downstream 75784 26798811 ~ 26801395 (+) False srsf2b

Expression Profile