RNA id: TU35394


Basic Information

Item Value
RNA id TU35394
length 402
lncRNA type inter_gene
GC content 0.46
exon number 3
gene id G23733
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 27046938 ~ 27047525 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

AGACAAGTAAACTTACAATGTAGGTTGGGATTTGGGTTTTTCTCCACATACTCCTGTGGTCCGCGATCATTACGTTCACTATTTTGTGGGGATTTAACGTCTCTCAACACACaaagcaaagTGTCGTGGATGAAGCGCACATTTTCTTCGTGCGCCGGCGTGAAAAGCTCTCCCGTATTCGTCGGCGATCGAGGGCTGGAGGTCCTCTTGTACGTGTGCATTCTAGGGGTAGAGGAGCTGGGAGAGACAACGGAAGACATTTAACCGTGacagcaaaatcatttttattatattatttaggtGCTAAAAAGGAGTCCAAGAACGTGCTCAAAGCGTACACGCAAAAACCGAAACCCCAAACTGAGAAAACAAACTCCGCAGGAGGCGCTTTTATAGCAGTGC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35360 lncRNA upstream 2556 27029868 ~ 27044382 (+) True G23712
TU35388 lncRNA upstream 9293 27023328 ~ 27037645 (+) True G23727
TU35366 lncRNA upstream 24204 27012599 ~ 27022734 (+) True G23714
TU35367 lncRNA upstream 24253 27012599 ~ 27022685 (+) False G23714
TU35353 lncRNA upstream 100941 26944207 ~ 26945997 (+) True G23709
TU35362 lncRNA downstream 2163 27049688 ~ 27053794 (+) True G23713
TU35363 lncRNA downstream 2163 27049688 ~ 27053794 (+) False G23713
TU35575 lncRNA downstream 201900 27249425 ~ 27252114 (+) True G23840
TU35606 lncRNA downstream 415474 27462999 ~ 27463302 (+) True G23869
TU35630 lncRNA downstream 425329 27472854 ~ 27475070 (+) True LOC122335648
XM_043235754.1 mRNA upstream 27045 27007494 ~ 27019893 (+) True cdr2l
XM_043235752.1 mRNA upstream 39135 26990895 ~ 27007803 (+) False recql5
XM_043228372.1 mRNA downstream 131553 27179078 ~ 27184592 (+) True nptx1l
XM_043233411.1 mRNA downstream 234302 27281827 ~ 27282406 (+) True LOC122335546
XM_043232716.1 mRNA downstream 260115 27307640 ~ 27386062 (+) True LOC122334820
XM_043233156.1 mRNA downstream 388287 27435812 ~ 27438843 (+) True LOC122335316
XM_043233293.1 mRNA downstream 411266 27458791 ~ 27460139 (+) True rasd4
TU35317 other upstream 199581 26846723 ~ 26847357 (+) True G23695
TU35298 other upstream 245543 26798811 ~ 26801395 (+) False srsf2b
TU35581 other downstream 234324 27281849 ~ 27282406 (+) False LOC122335546
TU35969 other downstream 1468118 28515643 ~ 28560324 (+) True G24115
XR_006248835.1 other downstream 1545290 28592815 ~ 28647092 (+) False LOC122334878
TU36019 other downstream 1659788 28707313 ~ 28708599 (+) False LOC122341395
TU36055 other downstream 1796316 28843841 ~ 28846292 (+) False LOC122335482

Expression Profile