RNA id: TU35697


Basic Information

Item Value
RNA id TU35697
length 352
lncRNA type intronic
GC content 0.41
exon number 2
gene id G23915
representative True

Chromosome Information

Item Value
chromosome id NC_056701.1
NCBI id CM032070.1
chromosome length 30200998
location 27719185 ~ 27719656 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTATAATCAAACCATGACTATTAATTTGTCTTTGAAGAGAGTTTATGACTTTTGCCCATAATGTTctggttcatttaaaatgcttgtTTCTCAGGAGCTGACTCCTGTTCTCTGAATTCTCTGAACTTTCTCTGGACAGTTTTAGAATGAGTGCAAGACAGAGCATCCATCTTGACATTCAGCAAAAGGTAAAGTTGGTAAAGTTGAAACGGGTAATGAATAAAGCCCATCGAGCTTGTCTAGGATTCAATCTCTTTGCATCTCTAAGGTTTTGCAGATTCTTATGATCCGCCCATACTACAAAGAGACGTGCAGCGCCCTCCAGTCAACTCCTCTACTCCTCTAGAGCCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35695 lncRNA upstream 4294 27713538 ~ 27714891 (+) True G23914
TU35690 lncRNA upstream 29327 27686894 ~ 27689858 (+) True G23909
TU35653 lncRNA upstream 185362 27530689 ~ 27533823 (+) True G23886
TU35630 lncRNA upstream 244115 27472854 ~ 27475070 (+) True LOC122335648
XR_006248989.1 lncRNA upstream 244142 27473292 ~ 27475043 (+) False LOC122335648
TU35636 lncRNA downstream 14886 27734542 ~ 27800229 (+) False G23878
TU35637 lncRNA downstream 14886 27734542 ~ 27800229 (+) True G23878
TU35622 lncRNA downstream 33783 27753439 ~ 27816189 (+) True G23873
TU35641 lncRNA downstream 76186 27795842 ~ 27797060 (+) False G23878
TU35707 lncRNA downstream 84955 27804611 ~ 27806333 (+) True G23924
XM_043232585.1 mRNA upstream 110048 27574258 ~ 27609137 (+) False LOC122334574
XM_043232600.1 mRNA upstream 116959 27574258 ~ 27602226 (+) True LOC122334574
XM_043232595.1 mRNA upstream 118424 27574258 ~ 27600761 (+) False LOC122334574
XM_043232632.1 mRNA upstream 162655 27533844 ~ 27556530 (+) True LOC122334614
XM_043232694.1 mRNA upstream 230828 27475325 ~ 27488357 (+) True LOC122334777
XM_043233179.1 mRNA downstream 8618 27728274 ~ 27729892 (+) True LOC122335347
XM_043233192.1 mRNA downstream 8668 27728324 ~ 27729892 (+) False LOC122335347
XM_043233185.1 mRNA downstream 8680 27728336 ~ 27729892 (+) False LOC122335347
XM_043233349.1 mRNA downstream 232095 27951751 ~ 27952457 (+) True LOC122335462
XM_043232688.1 mRNA downstream 316764 28036420 ~ 28068099 (+) True LOC122334736
TU35581 other upstream 436779 27281849 ~ 27282406 (+) False LOC122335546
TU35317 other upstream 871828 26846723 ~ 26847357 (+) True G23695
TU35299 other upstream 917790 26798811 ~ 26801395 (+) False srsf2b
TU35969 other downstream 795987 28515643 ~ 28560324 (+) True G24115
XR_006248835.1 other downstream 873159 28592815 ~ 28647092 (+) False LOC122334878
TU36019 other downstream 987657 28707313 ~ 28708599 (+) False LOC122341395
TU36055 other downstream 1124185 28843841 ~ 28846292 (+) False LOC122335482
TU36269 other downstream 1509097 29228753 ~ 29230230 (+) False cenpx

Expression Profile